More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A0868 on replicon NC_009457
Organism: Vibrio cholerae O395



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_2530  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.82 
 
 
533 aa  640    Shewanella baltica OS223  Bacteria  normal  0.616311  hitchhiker  0.00580613 
 
 
-
 
NC_009997  Sbal195_1793  methyl-accepting chemotaxis sensory transducer  61.01 
 
 
533 aa  642    Shewanella baltica OS195  Bacteria  normal  0.0175347  normal  0.776493 
 
 
-
 
NC_009457  VC0395_A0868  methyl-accepting chemotaxis protein  100 
 
 
536 aa  1080    Vibrio cholerae O395  Bacteria  hitchhiker  0.000231989  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
533 aa  658    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
533 aa  647    Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  39.78 
 
 
538 aa  354  2e-96  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
540 aa  295  1e-78  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  35.16 
 
 
545 aa  271  2e-71  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2119  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
548 aa  267  2.9999999999999995e-70  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.21 
 
 
546 aa  264  3e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  35.76 
 
 
548 aa  259  6e-68  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009831  Ssed_1983  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
548 aa  256  5e-67  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000213036  normal  0.437149 
 
 
-
 
NC_010501  PputW619_2757  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
544 aa  256  8e-67  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2601  chemotaxis sensory transducer  33.33 
 
 
569 aa  255  2.0000000000000002e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.441915  normal  0.36116 
 
 
-
 
NC_009438  Sputcn32_0672  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
568 aa  255  2.0000000000000002e-66  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2659  methyl-accepting chemotaxis protein  34.31 
 
 
556 aa  254  2.0000000000000002e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
546 aa  255  2.0000000000000002e-66  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1776  histidine kinase, HAMP region: chemotaxis sensory transducer  33.88 
 
 
543 aa  253  7e-66  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.363817 
 
 
-
 
NC_009512  Pput_2828  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
544 aa  252  1e-65  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
558 aa  250  4e-65  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03718  putative chemotaxis sensory protein  33.02 
 
 
540 aa  249  1e-64  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2174  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
544 aa  249  1e-64  Pseudomonas mendocina ymp  Bacteria  normal  decreased coverage  0.00506259 
 
 
-
 
NC_009483  Gura_3394  methyl-accepting chemotaxis sensory transducer  30.76 
 
 
664 aa  249  1e-64  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000171268  n/a   
 
 
-
 
NC_008700  Sama_2327  putative methyl-accepting chemotaxis sensory transducer  35.12 
 
 
554 aa  248  3e-64  Shewanella amazonensis SB2B  Bacteria  normal  0.644098  normal  0.637343 
 
 
-
 
NC_002947  PP_2861  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
544 aa  247  4e-64  Pseudomonas putida KT2440  Bacteria  normal  normal  0.445183 
 
 
-
 
NC_010322  PputGB1_2920  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
544 aa  244  3.9999999999999997e-63  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2617  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
548 aa  243  6e-63  Shewanella woodyi ATCC 51908  Bacteria  normal  0.224982  normal  0.210295 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  42.09 
 
 
541 aa  243  6e-63  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  32.8 
 
 
554 aa  238  3e-61  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3699  methyl-accepting chemotaxis protein  36.38 
 
 
543 aa  237  4e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1030  methyl-accepting chemotaxis protein  33.13 
 
 
549 aa  235  1.0000000000000001e-60  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0461  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
569 aa  234  4.0000000000000004e-60  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2596  methyl-accepting chemotaxis protein  32.3 
 
 
564 aa  233  5e-60  Vibrio cholerae O395  Bacteria  unclonable  0.00000000000057467  n/a   
 
 
-
 
NC_002939  GSU0400  methyl-accepting chemotaxis protein  31.36 
 
 
549 aa  232  1e-59  Geobacter sulfurreducens PCA  Bacteria  normal  0.431065  n/a   
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
554 aa  230  6e-59  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  43.88 
 
 
637 aa  228  2e-58  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
552 aa  226  6e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008345  Sfri_2212  methyl-accepting chemotaxis sensory transducer  31.48 
 
 
549 aa  226  6e-58  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
564 aa  226  1e-57  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  38.58 
 
 
627 aa  225  2e-57  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  31.26 
 
 
554 aa  224  2e-57  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  31.26 
 
 
554 aa  224  2e-57  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_001822  methyl-accepting chemotaxis protein  34.42 
 
 
557 aa  224  3e-57  Vibrio sp. Ex25  Bacteria  unclonable  0.00000124429  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  33.06 
 
 
554 aa  224  3e-57  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
554 aa  224  3e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2116  methyl-accepting chemotaxis sensory transducer  31.18 
 
 
545 aa  223  4.9999999999999996e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
554 aa  223  7e-57  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  31.99 
 
 
554 aa  223  7e-57  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1321  methyl-accepting chemotaxis sensory transducer  28.83 
 
 
566 aa  223  9e-57  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.00082247  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  35.74 
 
 
638 aa  222  9.999999999999999e-57  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.68 
 
 
541 aa  222  9.999999999999999e-57  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  31.07 
 
 
554 aa  221  1.9999999999999999e-56  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.51 
 
 
554 aa  221  1.9999999999999999e-56  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  32.51 
 
 
554 aa  221  3e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.11 
 
 
630 aa  221  3e-56  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2240  methyl-accepting chemotaxis protein  28.99 
 
 
545 aa  220  3.9999999999999997e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.74 
 
 
627 aa  220  6e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009457  VC0395_A2871  methyl-accepting chemotaxis protein  34.14 
 
 
541 aa  219  7e-56  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000270316  n/a   
 
 
-
 
NC_009831  Ssed_2783  methyl-accepting chemotaxisprotein  30.47 
 
 
690 aa  219  7.999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.468562 
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  31.07 
 
 
554 aa  219  1e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_1365  methyl-accepting chemotaxis sensory transducer  29.39 
 
 
566 aa  219  1e-55  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
631 aa  219  1e-55  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
638 aa  219  1e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  35.82 
 
 
626 aa  218  2e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.26 
 
 
639 aa  217  5e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  42.04 
 
 
636 aa  217  5e-55  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  41.79 
 
 
552 aa  217  5e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  31.83 
 
 
554 aa  216  5.9999999999999996e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_008577  Shewana3_2254  methyl-accepting chemotaxis sensory transducer  30.31 
 
 
545 aa  216  5.9999999999999996e-55  Shewanella sp. ANA-3  Bacteria  normal  normal  0.492 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  31.61 
 
 
559 aa  216  7e-55  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
630 aa  216  7e-55  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  37.4 
 
 
627 aa  216  8e-55  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
492 aa  216  8e-55  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  30.87 
 
 
554 aa  216  9e-55  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
630 aa  216  9e-55  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.19 
 
 
630 aa  215  9.999999999999999e-55  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  35.19 
 
 
630 aa  215  9.999999999999999e-55  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  33.21 
 
 
560 aa  216  9.999999999999999e-55  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
492 aa  215  1.9999999999999998e-54  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  37.03 
 
 
633 aa  214  1.9999999999999998e-54  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  39.89 
 
 
629 aa  214  1.9999999999999998e-54  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  39.55 
 
 
640 aa  215  1.9999999999999998e-54  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.2 
 
 
558 aa  215  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1767  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
545 aa  214  1.9999999999999998e-54  Shewanella sp. MR-4  Bacteria  normal  0.381763  normal 
 
 
-
 
NC_010322  PputGB1_1912  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
492 aa  214  1.9999999999999998e-54  Pseudomonas putida GB-1  Bacteria  normal  0.407863  hitchhiker  0.000000143908 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  31.43 
 
 
554 aa  215  1.9999999999999998e-54  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1845  methyl-accepting chemotaxis sensory transducer  29.02 
 
 
545 aa  214  1.9999999999999998e-54  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  38.7 
 
 
636 aa  215  1.9999999999999998e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  32.66 
 
 
561 aa  215  1.9999999999999998e-54  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  30.87 
 
 
554 aa  215  1.9999999999999998e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2358  methyl-accepting chemotaxis sensory transducer  30.43 
 
 
545 aa  214  2.9999999999999995e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3052  methyl-accepting chemotaxis sensory transducer  31.4 
 
 
554 aa  214  2.9999999999999995e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  41.32 
 
 
433 aa  214  2.9999999999999995e-54  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
572 aa  214  2.9999999999999995e-54  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
634 aa  214  2.9999999999999995e-54  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2000  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.43 
 
 
545 aa  214  3.9999999999999995e-54  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000194984 
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  38.55 
 
 
548 aa  213  4.9999999999999996e-54  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
637 aa  213  4.9999999999999996e-54  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.91 
 
 
638 aa  213  5.999999999999999e-54  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
645 aa  213  5.999999999999999e-54  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>