| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A2871 |
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| Symbol | |
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| ID | 5137436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 3021362 |
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| End bp | 3022987 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640534315 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001218716 |
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| Protein GI | 147673592 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000270316 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AAACCCAAGC TTATTTATTA TCTGCCATCA TTCTCGCCGC TCTTCTCGCG
CTAACCGCGA CCGGACTGTG GACGTTACGT GTGGCCAGCA ATCTCGATAA CAAAGCGCGT
GTAACCGAGC TGTTTAATAG TGCCTACAGT ATTTTGACTG AGGTAGAGAA GCTGGCTCAA
GAAGGCAAAA TGTCGGAGCC AGAAGCCAAA GCGCTCGCCA CCCGCCTAAT GCGCAACAAT
CTCTACAAAG ATAATGAATA TGTGTATGTG GCAGATGAAA ATATGACTTT CGTGGCGACG
CCGCTCGACC CACAACTGCA TGACACCAGT TTTCACGATT TTAAAGATGG TAAAGGCAAT
AGTGTTGGCC GCTTAATTCA AGATGTGCTG CGTCATCAAT CCGGCAAGTT GGTGGAATAT
ACGTGGACAC AAAAGCAAGC AGATGGCTCG ATTGAAGAAA AGCTCTCCAT CGCGCGCAAA
ACGCCACACT GGGGCTGGGT TGTCGGCACG GGTATTGGTT TTAACGAAGT GAATGAGCGT
TTTTGGTCTA CCGCGCAATG GCAACTAAGC TTATGTGTGG TGATCGCCGT TGCGATTTTA
TCTCTGCTAC TGGTCGCGAT TCGTAAAATA CTGCTGATTA TCGGCGGTGA ACCAAATGAG
GTACGCAGCG CAGTACAAGC GGTGGCACAA GGCCGCATTC GTCGTGAATT TGTGATAAAA
GCCCCTAAAG AGAGTATTTA TGGTGCAGTG CAGCAGATGA ACAGCTCACT TGCAGACTTG
GTGGCTAAGC TTGAGCAATC CATGGTTGCT TTACGCTCTG AATTAGCCGG CGCAGGTACT
CGTGCCAAAA GCATTGCCGA ATTAACGGAT AGCCAGCAGC AATCTACCGC CATGATTGCC
ACTGCAATGA CCGAAATGGC CTCTTCAGCG AACCAAGTCG CCGATTCTGC GCGTGATACC
GCATTCAACA CCGATCAAGC GGATCAGCAA AGCCAGCATA CGCAAAAGCT CATCCACAAC
ACGGTAAGCA ATATTCAAGG CTTGGCGACC CAATTACAAA CTGCGAGCAC CGCGGTTGCC
GATCTGGATC TGGATGTCAA AAACATCGCT AAAGTACTGG ATGTGATTGG TGATATTGCA
GAGCAAACCA ATTTACTGGC GCTGAATGCC GCGATTGAAG CAGCACGCGC TGGCGAGCAA
GGGCGCGGTT TTGCCGTCGT GGCTGATGAA GTGCGTAACT TAGCGGGCCG CACGCAAACC
AGTACCAAAG AGATCCAGCA GATGATCCAC AATTTGCAGG AAGGGTCGCG TAATGCGATT
CAAACCATCC AGATTTGTGG GCAAACCAGT CAAAGCAGTG TGCAAGAGTC AGAAAATGCC
GCTTCTGCGC TGGCATTGAT TGTCAGCGCA CTCGAAAGCG TCTCTTCGAT GAGCCATCAA
ATAGCCACGG CGGCCGCTGA GCAAACCCAA GTCAGCGATG ATATTGCGCG CCGAATCAAT
ATGATTGAAG AAAGTGGCTC AAAACTGAGC CGAGTGGTGA TGGAGAGCCA CAATAGTACG
CAAACTCTCA CCAAACTCGC CCGCGAGTTA GAACAGTGGG CTGCGCATTT TGAGGTCACT
CGTTAA
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| Protein sequence | MKLKTQAYLL SAIILAALLA LTATGLWTLR VASNLDNKAR VTELFNSAYS ILTEVEKLAQ
EGKMSEPEAK ALATRLMRNN LYKDNEYVYV ADENMTFVAT PLDPQLHDTS FHDFKDGKGN
SVGRLIQDVL RHQSGKLVEY TWTQKQADGS IEEKLSIARK TPHWGWVVGT GIGFNEVNER
FWSTAQWQLS LCVVIAVAIL SLLLVAIRKI LLIIGGEPNE VRSAVQAVAQ GRIRREFVIK
APKESIYGAV QQMNSSLADL VAKLEQSMVA LRSELAGAGT RAKSIAELTD SQQQSTAMIA
TAMTEMASSA NQVADSARDT AFNTDQADQQ SQHTQKLIHN TVSNIQGLAT QLQTASTAVA
DLDLDVKNIA KVLDVIGDIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRNLAGRTQT
STKEIQQMIH NLQEGSRNAI QTIQICGQTS QSSVQESENA ASALALIVSA LESVSSMSHQ
IATAAAEQTQ VSDDIARRIN MIEESGSKLS RVVMESHNST QTLTKLAREL EQWAAHFEVT
R
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