More than 300 homologs were found in PanDaTox collection
for query gene Shew_1929 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  100 
 
 
662 aa  1344    Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_011663  Sbal223_2369  methyl-accepting chemotaxis sensory transducer  57.62 
 
 
664 aa  719    Shewanella baltica OS223  Bacteria  normal  0.0315396  normal  0.0961625 
 
 
-
 
NC_008577  Shewana3_1790  methyl-accepting chemotaxis sensory transducer  57.94 
 
 
664 aa  716    Shewanella sp. ANA-3  Bacteria  normal  0.119789  normal  0.182995 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  54.75 
 
 
664 aa  704    Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1813  methyl-accepting chemotaxis sensory transducer  56.28 
 
 
664 aa  717    Shewanella putrefaciens CN-32  Bacteria  normal  0.280908  n/a   
 
 
-
 
NC_009997  Sbal195_1957  methyl-accepting chemotaxis sensory transducer  57.32 
 
 
664 aa  714    Shewanella baltica OS195  Bacteria  normal  0.257458  normal  0.211978 
 
 
-
 
NC_009665  Shew185_1950  methyl-accepting chemotaxis sensory transducer  57.62 
 
 
664 aa  716    Shewanella baltica OS185  Bacteria  normal  0.0377955  n/a   
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  55.27 
 
 
666 aa  688    Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_008321  Shewmr4_1685  methyl-accepting chemotaxis sensory transducer  57.34 
 
 
664 aa  714    Shewanella sp. MR-4  Bacteria  normal  0.0832618  normal  0.158688 
 
 
-
 
NC_009831  Ssed_2325  methyl-accepting chemotaxis sensory transducer  64.8 
 
 
664 aa  852    Shewanella sediminis HAW-EB3  Bacteria  normal  0.100516  hitchhiker  0.00420774 
 
 
-
 
NC_008322  Shewmr7_1760  methyl-accepting chemotaxis sensory transducer  57.64 
 
 
664 aa  718    Shewanella sp. MR-7  Bacteria  normal  0.106787  normal  0.536367 
 
 
-
 
NC_008345  Sfri_1352  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
668 aa  648    Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2282  methyl-accepting chemotaxis sensory transducer  63.9 
 
 
664 aa  843    Shewanella woodyi ATCC 51908  Bacteria  normal  0.330304  normal 
 
 
-
 
NC_009052  Sbal_1924  methyl-accepting chemotaxis sensory transducer  59.25 
 
 
531 aa  592  1e-168  Shewanella baltica OS155  Bacteria  normal  0.666083  n/a   
 
 
-
 
NC_003910  CPS_1937  methyl-accepting chemotaxis protein  37.46 
 
 
662 aa  358  9.999999999999999e-98  Colwellia psychrerythraea 34H  Bacteria  normal  0.0215017  n/a   
 
 
-
 
NC_003910  CPS_0763  methyl-accepting chemotaxis protein  34.88 
 
 
661 aa  301  3e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1041  methyl-accepting chemotaxis sensory transducer  32.69 
 
 
661 aa  281  3e-74  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  34.31 
 
 
661 aa  277  4e-73  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  32.56 
 
 
653 aa  268  2.9999999999999995e-70  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_007575  Suden_0209  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
658 aa  264  4.999999999999999e-69  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.603066  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  32.87 
 
 
653 aa  261  2e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_007575  Suden_0983  methyl-accepting chemotaxis sensory transducer  32.38 
 
 
720 aa  251  2e-65  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0989  methyl-accepting chemotaxis sensory transducer  31.59 
 
 
720 aa  248  2e-64  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2284  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
653 aa  246  6.999999999999999e-64  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00297466 
 
 
-
 
NC_012917  PC1_0413  methyl-accepting chemotaxis sensory transducer  30.28 
 
 
653 aa  246  9.999999999999999e-64  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
605 aa  244  3e-63  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
552 aa  233  8.000000000000001e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_013421  Pecwa_0492  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
649 aa  233  9e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40 
 
 
638 aa  230  5e-59  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_008740  Maqu_3099  methyl-accepting chemotaxis sensory transducer  28.87 
 
 
672 aa  229  8e-59  Marinobacter aquaeolei VT8  Bacteria  normal  0.500846  n/a   
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
543 aa  226  1e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
568 aa  225  2e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  45.19 
 
 
636 aa  225  2e-57  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  40.72 
 
 
716 aa  223  7e-57  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.3 
 
 
523 aa  223  8e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.61 
 
 
713 aa  222  9.999999999999999e-57  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.83 
 
 
712 aa  222  1.9999999999999999e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.55 
 
 
712 aa  221  3e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009831  Ssed_0837  methyl-accepting chemotaxis sensory transducer  37.44 
 
 
554 aa  221  3.9999999999999997e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
640 aa  221  5e-56  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
541 aa  221  5e-56  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  46.58 
 
 
679 aa  220  7e-56  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  46.56 
 
 
572 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  46.18 
 
 
637 aa  219  1e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  39.36 
 
 
548 aa  219  1e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
634 aa  219  2e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
620 aa  219  2e-55  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_012912  Dd1591_1251  methyl-accepting chemotaxis sensory transducer  27.56 
 
 
646 aa  218  2e-55  Dickeya zeae Ech1591  Bacteria  normal  0.457093  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  36.62 
 
 
554 aa  218  4e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
540 aa  217  5e-55  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0824  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
554 aa  217  5e-55  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.00067966 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
552 aa  216  7e-55  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008577  Shewana3_3299  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
554 aa  216  7e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
634 aa  216  9e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1383  methyl-accepting chemotaxis sensory transducer  27.32 
 
 
705 aa  216  9.999999999999999e-55  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3199  methyl-accepting chemotaxis sensory transducer  36.87 
 
 
554 aa  216  9.999999999999999e-55  Shewanella sp. MR-7  Bacteria  normal  normal  0.927661 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  39 
 
 
620 aa  216  9.999999999999999e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
620 aa  215  1.9999999999999998e-54  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
650 aa  215  1.9999999999999998e-54  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  36.81 
 
 
620 aa  215  1.9999999999999998e-54  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009831  Ssed_3759  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
554 aa  214  4.9999999999999996e-54  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0990388  normal 
 
 
-
 
NC_009438  Sputcn32_3200  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
554 aa  214  4.9999999999999996e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3789  methyl-accepting chemotaxis sensory transducer  42.07 
 
 
554 aa  213  9e-54  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1114  methyl-accepting chemotaxis sensory transducer  30.68 
 
 
700 aa  213  9e-54  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.655641 
 
 
-
 
NC_011312  VSAL_I0920  nitrate and nitrite sensing methyl-accepting chemotaxis protein  30.35 
 
 
662 aa  213  1e-53  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.46 
 
 
634 aa  213  1e-53  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
620 aa  213  1e-53  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009052  Sbal_0641  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
568 aa  212  2e-53  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0982  methyl-accepting chemotaxis sensory transducer  28.21 
 
 
663 aa  212  2e-53  Marinomonas sp. MWYL1  Bacteria  normal  0.293812  normal 
 
 
-
 
NC_011663  Sbal223_3601  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.75 
 
 
554 aa  211  3e-53  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3666  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
554 aa  211  3e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  35.82 
 
 
642 aa  211  5e-53  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  41.8 
 
 
493 aa  210  5e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
554 aa  211  5e-53  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
554 aa  210  6e-53  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
558 aa  210  7e-53  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3617  methyl-accepting chemotaxis sensory transducer  36.18 
 
 
554 aa  210  7e-53  Shewanella baltica OS195  Bacteria  normal  normal  0.964358 
 
 
-
 
NC_010501  PputW619_1752  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
492 aa  210  7e-53  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000224536 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  37.82 
 
 
548 aa  210  8e-53  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_008577  Shewana3_3491  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
554 aa  209  9e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2310  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
492 aa  209  1e-52  Pseudomonas putida KT2440  Bacteria  normal  0.178377  decreased coverage  0.00000773933 
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  38.11 
 
 
541 aa  209  1e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3459  methyl-accepting chemotaxis sensory transducer  41.18 
 
 
492 aa  209  1e-52  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000433284 
 
 
-
 
NC_008321  Shewmr4_3323  methyl-accepting chemotaxis sensory transducer  41.75 
 
 
554 aa  209  1e-52  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
773 aa  209  1e-52  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_011663  Sbal223_3422  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.37 
 
 
554 aa  209  1e-52  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
554 aa  209  1e-52  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  39.2 
 
 
633 aa  208  2e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.23 
 
 
619 aa  208  2e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_008322  Shewmr7_0630  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
554 aa  208  2e-52  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  41.11 
 
 
411 aa  208  2e-52  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  39.06 
 
 
639 aa  208  3e-52  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_012880  Dd703_2657  methyl-accepting chemotaxis sensory transducer  27.12 
 
 
646 aa  207  4e-52  Dickeya dadantii Ech703  Bacteria  normal  0.653915  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  40.18 
 
 
620 aa  207  5e-52  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  35.03 
 
 
555 aa  207  5e-52  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
638 aa  207  7e-52  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.17 
 
 
626 aa  207  7e-52  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  38.94 
 
 
642 aa  207  7e-52  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_011901  Tgr7_0712  putative methyl-accepting chemotaxis sensory transducer  45.93 
 
 
624 aa  207  7e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  41.1 
 
 
638 aa  206  8e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
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