More than 300 homologs were found in PanDaTox collection
for query gene Mvan_3991 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_3991  putative GAF sensor protein  100 
 
 
301 aa  607  9.999999999999999e-173  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.637785  normal 
 
 
-
 
NC_008726  Mvan_3973  putative GAF sensor protein  33.89 
 
 
399 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.057323  normal 
 
 
-
 
NC_008726  Mvan_0348  putative GAF sensor protein  32.49 
 
 
341 aa  121  9.999999999999999e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.858795 
 
 
-
 
NC_008726  Mvan_0349  response regulator receiver protein  32.76 
 
 
392 aa  119  3.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.83845 
 
 
-
 
NC_013739  Cwoe_4359  transcriptional regulator, LuxR family  36.69 
 
 
302 aa  103  5e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4360  transcriptional regulator, LuxR family  34.25 
 
 
381 aa  83.6  0.000000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2625  multi-sensor signal transduction histidine kinase  34.5 
 
 
875 aa  73.6  0.000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2563  two component transcriptional regulator, LuxR family  52.78 
 
 
229 aa  72.8  0.000000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.127898  normal 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  46.15 
 
 
218 aa  68.9  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  55.93 
 
 
203 aa  66.6  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal 
 
 
-
 
NC_007912  Sde_0994  response regulator receiver domain-containing protein  50 
 
 
221 aa  66.2  0.0000000006  Saccharophagus degradans 2-40  Bacteria  normal  0.16925  normal 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  40.45 
 
 
231 aa  66.2  0.0000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0594  multi-sensor signal transduction histidine kinase  28.78 
 
 
880 aa  65.9  0.0000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.333457  n/a   
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  52.11 
 
 
211 aa  64.3  0.000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  52.54 
 
 
213 aa  65.1  0.000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  55 
 
 
217 aa  63.9  0.000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  50 
 
 
220 aa  64.3  0.000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_04700  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  46.97 
 
 
198 aa  63.9  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.162406  normal 
 
 
-
 
NC_013595  Sros_3003  protein kinase  46.58 
 
 
792 aa  63.9  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6539  two component transcriptional regulator, LuxR family  46.97 
 
 
198 aa  63.9  0.000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.370011  n/a   
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  56.6 
 
 
217 aa  63.5  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_5613  transcriptional regulator, LuxR family  48.57 
 
 
238 aa  62.8  0.000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4001  two component transcriptional regulator, LuxR family  54.84 
 
 
236 aa  62.4  0.000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  63.27 
 
 
209 aa  62.8  0.000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  46.58 
 
 
224 aa  62.4  0.000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal 
 
 
-
 
NC_013739  Cwoe_1242  transcriptional regulator, LuxR family  44.29 
 
 
81 aa  61.6  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0473699  normal  0.519491 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  52.38 
 
 
215 aa  61.6  0.00000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.132796 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.67 
 
 
209 aa  62  0.00000001  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3277  transcriptional regulator, LuxR family  50 
 
 
224 aa  62.4  0.00000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.86 
 
 
220 aa  62.4  0.00000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_011729  PCC7424_0164  two component transcriptional regulator, LuxR family  43.42 
 
 
234 aa  62.4  0.00000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0441129 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  44.74 
 
 
226 aa  62  0.00000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  52.24 
 
 
250 aa  62  0.00000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_014248  Aazo_2840  LuxR family two component transcriptional regulator  43.37 
 
 
238 aa  62  0.00000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  42.57 
 
 
219 aa  61.2  0.00000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.218307 
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  52.63 
 
 
207 aa  61.6  0.00000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_013757  Gobs_4449  two component transcriptional regulator, LuxR family  41.57 
 
 
253 aa  61.2  0.00000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.41 
 
 
221 aa  60.8  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  55.74 
 
 
238 aa  61.2  0.00000002  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  47.3 
 
 
212 aa  60.8  0.00000002  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  36.84 
 
 
213 aa  61.2  0.00000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  56.36 
 
 
212 aa  61.2  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  53.03 
 
 
211 aa  61.2  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  39.29 
 
 
216 aa  61.2  0.00000002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  49.3 
 
 
234 aa  60.5  0.00000003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.48 
 
 
226 aa  60.8  0.00000003  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  52.54 
 
 
222 aa  60.5  0.00000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  51.56 
 
 
253 aa  60.8  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  36.67 
 
 
229 aa  60.8  0.00000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  41.67 
 
 
211 aa  60.5  0.00000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  48.61 
 
 
225 aa  60.8  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  56.6 
 
 
216 aa  60.8  0.00000003  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  36.11 
 
 
219 aa  60.5  0.00000003  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0654  two component LuxR family transcriptional regulator  51.52 
 
 
256 aa  60.8  0.00000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.639317  normal 
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  38.36 
 
 
228 aa  60.5  0.00000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  40.62 
 
 
218 aa  60.8  0.00000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3804  two component transcriptional regulator, LuxR family  46.38 
 
 
216 aa  60.1  0.00000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.185264  normal 
 
 
-
 
NC_007413  Ava_0661  two component LuxR family transcriptional regulator  51.85 
 
 
239 aa  60.1  0.00000004  Anabaena variabilis ATCC 29413  Bacteria  hitchhiker  0.0000223942  normal  0.0624831 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  43.53 
 
 
219 aa  60.5  0.00000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_010682  Rpic_2046  two component transcriptional regulator, LuxR family  42.86 
 
 
219 aa  60.1  0.00000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  36.27 
 
 
223 aa  60.1  0.00000004  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.15 
 
 
224 aa  60.5  0.00000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  44.83 
 
 
222 aa  60.1  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  50.82 
 
 
232 aa  60.1  0.00000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  49.3 
 
 
213 aa  60.5  0.00000004  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013205  Aaci_0139  GAF modulated transcriptional regulator, LuxR family  44.3 
 
 
506 aa  60.5  0.00000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1303  transcriptional regulator, LuxR family  58.93 
 
 
442 aa  60.5  0.00000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.0533222  normal 
 
 
-
 
NC_013131  Caci_1011  two component transcriptional regulator, LuxR family  30.46 
 
 
203 aa  60.1  0.00000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.109267 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  45.12 
 
 
243 aa  60.5  0.00000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_007614  Nmul_A0238  LuxR family transcriptional regulator  46.03 
 
 
267 aa  60.1  0.00000005  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.06 
 
 
239 aa  59.7  0.00000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_007333  Tfu_2278  LuxR response regulator receiver  54.55 
 
 
217 aa  59.7  0.00000006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6529  two component transcriptional regulator, LuxR family  47.76 
 
 
224 aa  59.7  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.270807  normal  0.114568 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  57.41 
 
 
207 aa  59.7  0.00000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_007802  Jann_3086  LuxR family transcriptional regulator  50 
 
 
292 aa  59.7  0.00000006  Jannaschia sp. CCS1  Bacteria  normal  normal  0.375824 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  52.83 
 
 
218 aa  59.7  0.00000006  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  41.79 
 
 
226 aa  59.7  0.00000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  48.53 
 
 
219 aa  59.7  0.00000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0925  response regulator receiver protein  40.54 
 
 
119 aa  59.7  0.00000006  Desulfotomaculum reducens MI-1  Bacteria  normal  0.592282  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  51.72 
 
 
218 aa  59.7  0.00000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1248  transcriptional regulator, LuxR family  46.97 
 
 
232 aa  59.3  0.00000007  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0191  LuxR family transcriptional regulator  35.87 
 
 
775 aa  59.3  0.00000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.563436 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.77 
 
 
211 aa  59.3  0.00000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4255  LuxR family transcriptional regulator  41.98 
 
 
227 aa  59.3  0.00000007  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0102406 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  43.08 
 
 
228 aa  59.3  0.00000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  42.35 
 
 
227 aa  59.3  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  47.89 
 
 
213 aa  59.3  0.00000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  54.72 
 
 
215 aa  59.3  0.00000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3046  ATP-dependent transcription regulator LuxR  40.51 
 
 
922 aa  58.9  0.00000009  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  53.7 
 
 
225 aa  58.9  0.00000009  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_010552  BamMC406_4781  LuxR family transcriptional regulator  41.98 
 
 
227 aa  58.9  0.00000009  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0502492  normal 
 
 
-
 
NC_008577  Shewana3_1152  two component LuxR family transcriptional regulator  44.16 
 
 
225 aa  58.9  0.00000009  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2681  response regulator receiver protein  41.67 
 
 
262 aa  58.9  0.00000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.217011  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33.12 
 
 
216 aa  58.9  0.00000009  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0020  two component transcriptional regulator, LuxR family  48.53 
 
 
229 aa  58.9  0.00000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  53.85 
 
 
225 aa  58.5  0.0000001  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  46.58 
 
 
216 aa  58.2  0.0000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1151  two component LuxR family transcriptional regulator  44.16 
 
 
225 aa  58.5  0.0000001  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  48.57 
 
 
226 aa  58.5  0.0000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  50 
 
 
226 aa  58.5  0.0000001  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
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