Gene Mvan_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_0349 
Symbol 
ID4645227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp381554 
End bp382732 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content67% 
IMG OID639803857 
Productresponse regulator receiver protein 
Protein accessionYP_951203 
Protein GI120401374 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.83845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCT CGATGATCAG CGACAGCGCG CGTACCGCAG CGGGGGCACG TCCCGGCGGT 
GAGTGGTGGG CGCGGGAGAT CGAACTGGTC GACCAACTGC GCGGCCTGCG TGAGCGGGCG
GCGCGAGAGT TGCGCGGCGC GGTGACGCTG CCCGCAGTCG AGTGGGATGT GCCCGGACGG
TCAGCCGAGG CGATCTCCGC CCTCACACAC TTGTGCATCG ACTCGTTGCG TCGTCTTTCC
GGCGGTGAAG TCGAACGCGC ACAACGGCTT TGCGACCTCG TCCTCGATCT GCAACGGTTG
GCGATGGACT GGTATCTGCA CGACACCGCC ATGCGCAGCC AGCGCCTTGC CGAGTGTGCG
GCCGGTCTGA GCAGGCTGCG TGGAGTCCCG AGTTCTGCAG CGCTGCTTGA CAATGCCTGC
CAGGAGTTGG TGTTGCGGTG TGGTTTTCAC CGTGCGGTGT TGTCGAAGGT CGAGAGTCAC
GGCTGGAAGC CGCTGATGCT CCACGACCGG TCGGCCGACG CCGGTGACTC CTGGTTCAGC
GACTGGATCA ATCAGACCGT GCCGCTGGTG CGGGACGCCC CCGAGGCCGA GATGATGTCG
CGACGCCGGC CCTCACTGGT GCACGACACC GACACCGCGC CGGTGTACCG CCCGTTGATC
GTGCACGCCG GTCGGTCGCG GTCCTATGTG GTCGCCCCGG TACTGCACGG TCGAGATGTG
GTCGGATTCC TGCACACCGA TCACCATCCG CTGGCGCGCA GGGTCGACGA GGCGGACCGA
GAAGTTGCGT GGGTCTTCGC GGACGGATTC AGCCACCTCT ACGAACGGGC GGTCCTGCTG
GAACGTCTGC GGGCGCAGCG GGAAAGTGTG CGCGAGCTGT TCTTCGGTGC GGTGGACCGG
ATAGACGAAC TGTGCGAGTC CGGTCTGGAT ACCCCGCGCG GGGCTGAGGC TGACCGCTGT
GGCGACACCG ACGGGCAGAC CGGCAGACCG CCCGTCACCC TCACCGAGCG CGAAGCCGAC
GTGTTCGACC TGATGGTGAC CGGGGCCAGC AATCAGGAGA TCGCCGACCG GCTCGTCATC
ACCGAAGGCA CGGTGAAATC GCACGTCAAA CACATCCTCC GCAAATACGG CGCGGTAAAC
CGCGCCCAGG CCATCGCGTG GGCGCTCAAC GGCGGCTGA
 
Protein sequence
MSVSMISDSA RTAAGARPGG EWWAREIELV DQLRGLRERA ARELRGAVTL PAVEWDVPGR 
SAEAISALTH LCIDSLRRLS GGEVERAQRL CDLVLDLQRL AMDWYLHDTA MRSQRLAECA
AGLSRLRGVP SSAALLDNAC QELVLRCGFH RAVLSKVESH GWKPLMLHDR SADAGDSWFS
DWINQTVPLV RDAPEAEMMS RRRPSLVHDT DTAPVYRPLI VHAGRSRSYV VAPVLHGRDV
VGFLHTDHHP LARRVDEADR EVAWVFADGF SHLYERAVLL ERLRAQRESV RELFFGAVDR
IDELCESGLD TPRGAEADRC GDTDGQTGRP PVTLTEREAD VFDLMVTGAS NQEIADRLVI
TEGTVKSHVK HILRKYGAVN RAQAIAWALN GG