More than 300 homologs were found in PanDaTox collection
for query gene Afer_1981 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  100 
 
 		 222 aa  421  1e-117  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  47.85 
 
 		 210 aa  147  9e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  48.33 
 
 		 209 aa  146  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  42.38 
 
 		 222 aa  144  2e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  46.12 
 
 		 209 aa  141  9.999999999999999e-33  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  45.45 
 
 		 207 aa  138  6e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.33 
 
 		 223 aa  137  1e-31  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  44.02 
 
 		 218 aa  136  3.0000000000000003e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  49.25 
 
 		 209 aa  133  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  47.09 
 
 		 211 aa  132  3e-30  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0451998 
 
 
-
 
NC_013093  Amir_1549  two component transcriptional regulator, LuxR family  43.6 
 
 		 238 aa  132  5e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.196807  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  45.28 
 
 		 212 aa  132  5e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  46.01 
 
 		 205 aa  131  7.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  41.75 
 
 		 235 aa  130  2.0000000000000002e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.21 
 
 		 216 aa  129  3e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  46.83 
 
 		 212 aa  127  1.0000000000000001e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  37.38 
 
 		 213 aa  127  1.0000000000000001e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  38.32 
 
 		 213 aa  127  2.0000000000000002e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  40.55 
 
 		 232 aa  127  2.0000000000000002e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  43.69 
 
 		 211 aa  127  2.0000000000000002e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  41.59 
 
 		 218 aa  126  2.0000000000000002e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  39.34 
 
 		 218 aa  127  2.0000000000000002e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  41.59 
 
 		 218 aa  126  2.0000000000000002e-28  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  40.57 
 
 		 207 aa  126  2.0000000000000002e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  41.31 
 
 		 212 aa  126  3e-28  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  43.54 
 
 		 207 aa  126  3e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  45.37 
 
 		 206 aa  126  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal  1 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  42.11 
 
 		 222 aa  126  3e-28  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  41.31 
 
 		 212 aa  125  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  38.79 
 
 		 219 aa  126  3e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  40.65 
 
 		 218 aa  125  4.0000000000000003e-28  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  45.63 
 
 		 207 aa  125  4.0000000000000003e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  42.93 
 
 		 211 aa  125  4.0000000000000003e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  39.52 
 
 		 217 aa  125  5e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  41.4 
 
 		 225 aa  125  5e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  38.36 
 
 		 216 aa  125  6e-28  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.35 
 
 		 215 aa  125  7e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  42.86 
 
 		 227 aa  125  7e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  35.81 
 
 		 215 aa  124  1e-27  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  39.34 
 
 		 228 aa  124  1e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  38.16 
 
 		 204 aa  124  1e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_0973  two component LuxR family transcriptional regulator  41.87 
 
 		 216 aa  124  1e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  0.255067  normal  0.404517 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  45.1 
 
 		 209 aa  123  2e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  36.28 
 
 		 215 aa  123  2e-27  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  36.28 
 
 		 215 aa  124  2e-27  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  35.81 
 
 		 215 aa  123  2e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  38.14 
 
 		 213 aa  122  3e-27  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  36.28 
 
 		 215 aa  122  4e-27  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  36.28 
 
 		 215 aa  122  5e-27  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  36.28 
 
 		 215 aa  122  5e-27  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  36.28 
 
 		 215 aa  122  5e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  36.28 
 
 		 215 aa  122  5e-27  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  44.66 
 
 		 207 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  36.28 
 
 		 215 aa  122  5e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  39.62 
 
 		 214 aa  122  5e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  44.17 
 
 		 209 aa  122  5e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  42.51 
 
 		 213 aa  122  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_013522  Taci_1568  two component transcriptional regulator, LuxR family  38.12 
 
 		 211 aa  122  6e-27  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  34.76 
 
 		 216 aa  122  6e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  42.4 
 
 		 222 aa  121  7e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  40.72 
 
 		 220 aa  121  7e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  44.93 
 
 		 208 aa  121  8e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  36.49 
 
 		 215 aa  121  9e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  44.12 
 
 		 212 aa  120  9.999999999999999e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  42.23 
 
 		 208 aa  121  9.999999999999999e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  40.93 
 
 		 221 aa  120  9.999999999999999e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  37.5 
 
 		 214 aa  120  1.9999999999999998e-26  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  42.18 
 
 		 207 aa  120  1.9999999999999998e-26  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  36.97 
 
 		 224 aa  120  1.9999999999999998e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  40 
 
 		 221 aa  120  1.9999999999999998e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.23 
 
 		 209 aa  119  3e-26  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  40.28 
 
 		 228 aa  119  3e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  42.25 
 
 		 213 aa  119  3e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  35.65 
 
 		 220 aa  119  3e-26  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  38.03 
 
 		 220 aa  119  3e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  41.51 
 
 		 225 aa  119  3.9999999999999996e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  36.99 
 
 		 223 aa  119  3.9999999999999996e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  38.76 
 
 		 222 aa  119  3.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.1 
 
 		 239 aa  119  4.9999999999999996e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.711047 
 
 
-
 
NC_014165  Tbis_3505  LuxR family two component transcriptional regulator  41 
 
 		 213 aa  119  4.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.345096  normal  1 
 
 
-
 
NC_009921  Franean1_1971  two component LuxR family transcriptional regulator  40.58 
 
 		 216 aa  118  6e-26  Frankia sp. EAN1pec  Bacteria  normal  0.356635  normal  0.773651 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  41.1 
 
 		 225 aa  118  6e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  40.09 
 
 		 220 aa  118  6e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_4145  two component transcriptional regulator, LuxR family  43.41 
 
 		 216 aa  118  7e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_3055  response regulator receiver  33.5 
 
 		 219 aa  118  7.999999999999999e-26  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  38.5 
 
 		 209 aa  118  7.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  39.9 
 
 		 208 aa  117  9e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  39.42 
 
 		 206 aa  117  9e-26  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  39.5 
 
 		 226 aa  117  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  39.81 
 
 		 225 aa  117  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  38.46 
 
 		 221 aa  117  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  37.09 
 
 		 248 aa  117  9.999999999999999e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  42.65 
 
 		 206 aa  117  9.999999999999999e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  40.65 
 
 		 213 aa  117  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  38.83 
 
 		 211 aa  116  1.9999999999999998e-25  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  35.91 
 
 		 222 aa  116  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  43.41 
 
 		 214 aa  116  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  42.58 
 
 		 234 aa  116  1.9999999999999998e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  43.54 
 
 		 216 aa  116  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  39.82 
 
 		 217 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
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