Gene Sden_3055 details

Gene Information

• Locus tag: Sden_3055
• ID: 4019581
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 3669176
• End bp: 3669835
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637957107
• Product: response regulator receiver
• Protein accession: YP_564056
• Protein GI: 91794405
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTC AGCAAACCAA TACAGCAAAG CCCAGTAAAA TTCGTGTTGG TCTGGTTGAC 
GACCAACAAC TTGTGCGTCA AGGAATCGCT AGCCTACTGG CGCTTTCGGA TAAGATAGAG 
GTCACCTGGC AAGCCGAAAA CGGTCAGCAA GCACTTACTC TACTGGCAAG CACTGCTATA 
GATATACTGC TCAGTGATAT AAGAATGCCT GTGATGGATG GGATAAGTTT GCTGAGCCAC 
ATTCGCGCCG ACAATAATCA ACTACCAACG CTTATGCTCA CCACCTTCGA TGACAGTGAA 
TTGTTTCTGA CCAGTTTACA TGCCGGCGCT AATGGCTTTT TATTAAAAGA TGTGTCCTTA 
GATAAATTAC TCAATGCCAT CGAAGTCATA GCCCAAGGCG GTGTGCTCAT TGAGCCTGTG 
GTTCTCAATC AATTAAGCCA ACAGGCGCCA ATTAATGCCC CTGAAGTTAA CCCGCTATCG 
GAGCGAGAAA CCAGCATACT TAAGTTTATG GCTAATGGCT GCTCGAACAA AGAAATAGCC 
ACTGGGGTAT TTTTAGCCGA AGGCACTGTC AAAAATCACG TGTCGAATAT CTTGTCCAAA 
CTCGGCTGTC GTGATCGCAC CCGCGCCGTG CTAAAAGGCT TAGAGTTAGG AATTATTTAA 

 

Protein sequence

MEIQQTNTAK PSKIRVGLVD DQQLVRQGIA SLLALSDKIE VTWQAENGQQ ALTLLASTAI 
DILLSDIRMP VMDGISLLSH IRADNNQLPT LMLTTFDDSE LFLTSLHAGA NGFLLKDVSL 
DKLLNAIEVI AQGGVLIEPV VLNQLSQQAP INAPEVNPLS ERETSILKFM ANGCSNKEIA 
TGVFLAEGTV KNHVSNILSK LGCRDRTRAV LKGLELGII