More than 300 homologs were found in PanDaTox collection
for query gene Mvan_3973 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_3973  putative GAF sensor protein  100 
 
 
399 aa  793    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.057323  normal 
 
 
-
 
NC_008726  Mvan_0349  response regulator receiver protein  39.51 
 
 
392 aa  177  4e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.83845 
 
 
-
 
NC_008726  Mvan_0348  putative GAF sensor protein  40.72 
 
 
341 aa  141  1.9999999999999998e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.858795 
 
 
-
 
NC_008726  Mvan_3991  putative GAF sensor protein  33.89 
 
 
301 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.637785  normal 
 
 
-
 
NC_013739  Cwoe_4360  transcriptional regulator, LuxR family  35.93 
 
 
381 aa  135  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4359  transcriptional regulator, LuxR family  34.01 
 
 
302 aa  116  6e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0530  transcriptional regulator, LuxR family  43.56 
 
 
217 aa  68.9  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  49.35 
 
 
214 aa  67.8  0.0000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.749326 
 
 
-
 
NC_011831  Cagg_2625  multi-sensor signal transduction histidine kinase  29.57 
 
 
875 aa  65.9  0.000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  57.14 
 
 
219 aa  65.9  0.000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0594  multi-sensor signal transduction histidine kinase  27.89 
 
 
880 aa  65.9  0.000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.333457  n/a   
 
 
-
 
NC_012917  PC1_0582  two component transcriptional regulator, LuxR family  26.94 
 
 
204 aa  65.1  0.000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2575  ATP-dependent transcriptional regulator, MalT-like, LuxR family  39.45 
 
 
917 aa  65.1  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4327  ATP-dependent transcription regulator LuxR  56.6 
 
 
1021 aa  65.5  0.000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  41.35 
 
 
223 aa  64.3  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  51.61 
 
 
229 aa  64.7  0.000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  49.23 
 
 
221 aa  64.3  0.000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013739  Cwoe_1303  transcriptional regulator, LuxR family  57.89 
 
 
442 aa  63.5  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.0533222  normal 
 
 
-
 
NC_008578  Acel_1390  two component LuxR family transcriptional regulator  50.79 
 
 
225 aa  63.2  0.000000007  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0848  transcriptional regulator, LuxR family  42.2 
 
 
954 aa  63.2  0.000000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  62.75 
 
 
214 aa  62.4  0.00000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2681  response regulator receiver protein  30.41 
 
 
262 aa  62.4  0.00000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.217011  normal 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  50.82 
 
 
221 aa  62.4  0.00000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0403461 
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  45.45 
 
 
208 aa  61.6  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_014248  Aazo_0930  LuxR family two component transcriptional regulator  42.55 
 
 
240 aa  62  0.00000002  'Nostoc azollae' 0708  Bacteria  normal  0.545376  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  55 
 
 
232 aa  62  0.00000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013739  Cwoe_0403  transcriptional regulator, LuxR family  55.74 
 
 
981 aa  61.6  0.00000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.106797 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  52.46 
 
 
231 aa  62  0.00000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  58.82 
 
 
218 aa  62.4  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013235  Namu_5023  transcriptional regulator, LuxR family  34.09 
 
 
982 aa  61.2  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2079  two component transcriptional regulator, LuxR family  57.69 
 
 
212 aa  61.6  0.00000003  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  52.38 
 
 
217 aa  61.6  0.00000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_009455  DehaBAV1_1162  two component LuxR family transcriptional regulator  48.33 
 
 
225 aa  61.2  0.00000003  Dehalococcoides sp. BAV1  Bacteria  normal  0.130665  n/a   
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  52.94 
 
 
210 aa  60.8  0.00000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001276  transcriptional regulator VpsT  49.06 
 
 
210 aa  60.8  0.00000004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  45.16 
 
 
217 aa  60.8  0.00000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013552  DhcVS_1132  DNA-binding response regulator, LuxR family  48.33 
 
 
225 aa  60.8  0.00000004  Dehalococcoides sp. VS  Bacteria  normal  0.893152  n/a   
 
 
-
 
NC_007413  Ava_1558  two component LuxR family transcriptional regulator  53.85 
 
 
240 aa  60.8  0.00000004  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142258 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  58.82 
 
 
210 aa  60.8  0.00000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  50 
 
 
209 aa  60.8  0.00000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  44.71 
 
 
212 aa  60.8  0.00000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  52.94 
 
 
210 aa  60.8  0.00000004  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  39.84 
 
 
220 aa  60.5  0.00000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2586  two component transcriptional regulator, LuxR family  49.18 
 
 
223 aa  60.5  0.00000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.646343  normal 
 
 
-
 
NC_002936  DET1350  LuxR family DNA-binding response regulator  33.33 
 
 
225 aa  60.1  0.00000006  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.00111586  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  52.63 
 
 
225 aa  60.5  0.00000006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_009972  Haur_1995  ATP-dependent transcription regulator LuxR  39.44 
 
 
1019 aa  60.1  0.00000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.686742  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  52.94 
 
 
210 aa  60.5  0.00000006  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  52.94 
 
 
210 aa  60.1  0.00000006  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013235  Namu_3459  ATP-dependent transcriptional regulator, MalT- like, LuxR family  50.94 
 
 
901 aa  60.5  0.00000006  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.000984222  hitchhiker  0.00326143 
 
 
-
 
NC_007947  Mfla_1927  LuxR family transcriptional regulator  37.35 
 
 
257 aa  60.1  0.00000007  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3769  transcriptional regulator, LuxR family  51.67 
 
 
205 aa  60.1  0.00000007  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0158689  normal  0.601222 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  56.6 
 
 
215 aa  60.1  0.00000007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  37.31 
 
 
212 aa  59.7  0.00000008  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_013165  Shel_00820  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.92 
 
 
320 aa  59.7  0.00000009  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  45.9 
 
 
228 aa  59.7  0.00000009  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_39510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.38 
 
 
216 aa  59.7  0.00000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.657091 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  47.76 
 
 
225 aa  58.9  0.0000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  58.82 
 
 
216 aa  58.9  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  54.72 
 
 
215 aa  59.3  0.0000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013521  Sked_37860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.72 
 
 
221 aa  59.3  0.0000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  47.3 
 
 
208 aa  59.3  0.0000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0882  LuxR family transcriptional regulator  48.39 
 
 
253 aa  59.3  0.0000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2417  two component transcriptional regulator, LuxR family  51.92 
 
 
226 aa  58.9  0.0000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  52.63 
 
 
213 aa  59.3  0.0000001  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013530  Xcel_0094  two component transcriptional regulator, LuxR family  49.15 
 
 
220 aa  58.9  0.0000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0145  LuxR family transcriptional regulator  48.44 
 
 
454 aa  58.9  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  48.33 
 
 
230 aa  58.9  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  51.85 
 
 
258 aa  59.3  0.0000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  51.67 
 
 
213 aa  59.7  0.0000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_011726  PCC8801_2367  two component transcriptional regulator, LuxR family  51.92 
 
 
226 aa  58.9  0.0000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_05153  hypothetical protein  49.06 
 
 
218 aa  59.3  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  47.62 
 
 
223 aa  58.5  0.0000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_011729  PCC7424_0164  two component transcriptional regulator, LuxR family  53.85 
 
 
234 aa  58.9  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0441129 
 
 
-
 
NC_011772  BCG9842_B3078  DNA-binding response regulator, LuxR family  51.67 
 
 
213 aa  58.2  0.0000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000185138 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  49.18 
 
 
215 aa  58.9  0.0000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  49.18 
 
 
215 aa  58.9  0.0000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  54.39 
 
 
242 aa  58.5  0.0000002  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  50.98 
 
 
223 aa  58.5  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  55.77 
 
 
219 aa  58.2  0.0000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_010581  Bind_3599  LuxR family transcriptional regulator  43.42 
 
 
235 aa  58.9  0.0000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.161431  normal 
 
 
-
 
NC_007492  Pfl01_0640  two component LuxR family transcriptional regulator  32.69 
 
 
269 aa  58.5  0.0000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  54.24 
 
 
224 aa  58.5  0.0000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  50 
 
 
215 aa  58.9  0.0000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  51.67 
 
 
213 aa  58.5  0.0000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  54.39 
 
 
253 aa  58.5  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4382  regulatory protein, LuxR  40.88 
 
 
1006 aa  58.2  0.0000002  Nocardioides sp. JS614  Bacteria  normal  0.172901  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  51.67 
 
 
213 aa  58.5  0.0000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  46.67 
 
 
226 aa  58.2  0.0000002  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  46.15 
 
 
207 aa  58.2  0.0000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  56.86 
 
 
220 aa  58.9  0.0000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_011884  Cyan7425_4554  two component transcriptional regulator, LuxR family  49.12 
 
 
245 aa  58.9  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.376132  normal  0.833141 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  49.18 
 
 
215 aa  58.9  0.0000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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