More than 300 homologs were found in PanDaTox collection
for query gene Xcel_0094 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_0094  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  430  1e-120  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  51.36 
 
 
230 aa  194  8.000000000000001e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  51.61 
 
 
226 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  49.31 
 
 
234 aa  191  5e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  48.85 
 
 
219 aa  190  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  50.93 
 
 
220 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  47.69 
 
 
225 aa  189  4e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  50.92 
 
 
247 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  50.46 
 
 
232 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  52.56 
 
 
222 aa  186  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  49.08 
 
 
226 aa  186  3e-46  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  49.06 
 
 
215 aa  185  5e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  52.8 
 
 
221 aa  184  8e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50.93 
 
 
221 aa  183  2.0000000000000003e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  48.85 
 
 
218 aa  182  3e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.254077 
 
 
-
 
NC_013595  Sros_8800  response regulator receiver protein  47.6 
 
 
215 aa  182  4.0000000000000006e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.752334  normal 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  48.65 
 
 
226 aa  182  5.0000000000000004e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  48.39 
 
 
220 aa  181  1e-44  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  46.22 
 
 
234 aa  180  2e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  48.4 
 
 
219 aa  180  2e-44  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  50.7 
 
 
216 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.07 
 
 
221 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  47.25 
 
 
223 aa  177  8e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  48.86 
 
 
225 aa  177  1e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.58 
 
 
218 aa  177  1e-43  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  50.93 
 
 
221 aa  176  2e-43  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  47.44 
 
 
224 aa  176  2e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.82 
 
 
224 aa  176  3e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  47.69 
 
 
215 aa  176  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  47.47 
 
 
239 aa  176  4e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  47.75 
 
 
226 aa  175  4e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.23 
 
 
218 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  47.91 
 
 
223 aa  175  5e-43  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  46.49 
 
 
225 aa  174  9e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  50.23 
 
 
220 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  48.42 
 
 
225 aa  174  9.999999999999999e-43  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  50 
 
 
217 aa  174  9.999999999999999e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  47.51 
 
 
226 aa  173  1.9999999999999998e-42  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  51.85 
 
 
224 aa  173  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  48.05 
 
 
244 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.03 
 
 
222 aa  173  1.9999999999999998e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.2 
 
 
221 aa  173  1.9999999999999998e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  45.54 
 
 
216 aa  173  1.9999999999999998e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  46.08 
 
 
226 aa  172  2.9999999999999996e-42  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  45.16 
 
 
219 aa  172  3.9999999999999995e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  45.95 
 
 
231 aa  172  3.9999999999999995e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  47.91 
 
 
211 aa  172  5e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.11 
 
 
230 aa  172  5e-42  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  44.91 
 
 
224 aa  172  5e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  45.95 
 
 
228 aa  171  9e-42  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  45.79 
 
 
225 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  49.53 
 
 
220 aa  171  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  48.88 
 
 
232 aa  171  1e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  45.79 
 
 
220 aa  170  2e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.58 
 
 
219 aa  169  2e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  47.03 
 
 
227 aa  169  3e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  45.83 
 
 
239 aa  169  3e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  47.69 
 
 
220 aa  169  4e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.58 
 
 
241 aa  168  6e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  45.66 
 
 
227 aa  168  6e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.93 
 
 
225 aa  168  7e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  45.85 
 
 
249 aa  168  7e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013947  Snas_5550  two component transcriptional regulator, LuxR family  45.71 
 
 
213 aa  168  7e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.159917  normal  0.0692801 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  49.77 
 
 
222 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.44 
 
 
217 aa  167  1e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.11 
 
 
229 aa  167  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  44.6 
 
 
218 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.84 
 
 
261 aa  167  1e-40  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  48.39 
 
 
219 aa  167  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  47.22 
 
 
233 aa  166  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  46.26 
 
 
226 aa  166  2e-40  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  46.12 
 
 
228 aa  167  2e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.15 
 
 
225 aa  166  2e-40  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013093  Amir_3004  two component transcriptional regulator, LuxR family  46.58 
 
 
223 aa  166  2e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0522265  n/a   
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  44.25 
 
 
225 aa  167  2e-40  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  46.82 
 
 
223 aa  166  2.9999999999999998e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  46.33 
 
 
230 aa  166  2.9999999999999998e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  46.4 
 
 
236 aa  166  4e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  45.79 
 
 
235 aa  165  4e-40  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  47 
 
 
223 aa  165  4e-40  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  41.99 
 
 
234 aa  165  5e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  45.09 
 
 
228 aa  165  5e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  44.55 
 
 
217 aa  165  5.9999999999999996e-40  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  47.03 
 
 
223 aa  165  5.9999999999999996e-40  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  46.98 
 
 
215 aa  164  1.0000000000000001e-39  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  41.67 
 
 
250 aa  164  1.0000000000000001e-39  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  46.58 
 
 
225 aa  164  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  46.51 
 
 
241 aa  164  1.0000000000000001e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  45.87 
 
 
224 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.44 
 
 
222 aa  163  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  41.82 
 
 
244 aa  163  2.0000000000000002e-39  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  42.34 
 
 
236 aa  162  3e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45 
 
 
226 aa  162  4.0000000000000004e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  45.12 
 
 
224 aa  162  4.0000000000000004e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  43.38 
 
 
219 aa  162  5.0000000000000005e-39  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  45.62 
 
 
225 aa  162  5.0000000000000005e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  42.62 
 
 
242 aa  161  6e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  45.87 
 
 
218 aa  161  7e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  47.44 
 
 
225 aa  161  7e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2518  two component transcriptional regulator, LuxR family  45.54 
 
 
225 aa  161  8.000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
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