| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3459 |
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| Symbol | |
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| ID | 8449074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3802491 |
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| End bp | 3805196 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042535 |
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| Product | ATP-dependent transcriptional regulator, MalT- like, LuxR family |
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| Protein accession | YP_003202775 |
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| Protein GI | 258653619 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000984222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00326143 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTCCA CCTCCGCACC GTCCGGGTCG CTGCACGCCT CCACCCGATT CCGCGCGCCC
ACCTACGTGC GCAACGTGAT CGAGCGCGAG CGGCTGCTCG ACGCGCTGGG CGAGGGGGGT
GGCCGGGCCC TGGTGGTCAT CCACGCCCCG GCCGGCTACG GCAAGACCAC ACTGGCCGTG
CAGTGGTTGC GGGTGCTGGC CGACGGCGGC GCGGTGCCGG CCTGGCTGGG TCTGCACCGG
GACGACAACG ACCCGCACTG GTTCCTTTTC CACCTGCTGG AGGCCGTGCG CCGGGCCGTG
CCGGCCGCCG GGGACGTCCT GGGCGACCTG CGGGACCTGT TGGAGCAGAA CGTCGAGGAC
ACCCAGACCT ACGCCCTGTC GGTGCTGCTG GAACAGATCG GCCGGCACGA CGGGCGGCTG
GTGCTGACCT TCGACGACTG GCACCTGATC GAGGACGCCC AGGTGCACCG CGCCCTGGTG
CACCTGCTCG ACTTCGCCCC GCCCAACCTC TCGGTCGTGC TGACCAGCCG GGTCCGGCCG
CGGCTGCCGC TGAGCCGGCT GCGGGTGCGC GGCCAGTTGA TCGAGATCGA CGCCGACACC
TTGCGTTTCG ATCTGGCCGA AACCCGTTCC TTCCTGGTCG ATTTGAACGG GCTGCGGCTC
GAGCCCGAGG ACATCGCCCG GGTCTCGGTC AGTACCGACG GCTGGGTCGC GGCGCTGCAA
CTGGTCTCGT TGTCCCTGCG GGACTGCGCC GATCCGACCG ACCTGATCGG CGGCTTCTCC
GGGCGGGACC ACTCGATCGG CGAGTACCTG GCCGAGAACG TGCTCGACGC GCTGCCCGGC
GACATCCTGG CCTTCCTGCT CGACACCTGC GTGGGGGACC GGCTCTGCGG CGAGCTGGCC
GACGCGCTGA GCGGGCGCAC CGACGGCCAG GCGATGCTGG AGGAACTGGA GCGGCGCGAT
CTGTTCCTGC GCCCGCTGGA CCCCGAGCGG CAGTGGTTCC GCTACCACCA CCTGTTCGCC
GACTACCTGC GCCGCCGGCT CGAGCGCGAC CAGCGGGACC GGGTGGCCGG GCTGCACCGG
CGGGCCGCCC AGTGGTTCGC CGCGCACGAC CTGGTGTCCG AGGCGGTCAG CCACGCGCTG
GCCGCCGGCG ACGTCGCCAT GGCCACCGAC CTGGTCGAAC GGCACGCCAT GGCCCAGGTC
GAGCACAGCC GGATGGTCAG CCTGCTCGGC CTGATCGGGC GGCTGCCGGC CGCCGCGGTC
AGCGAGCGAC CGCGCCTGCT GATGGCCCTG GCCTGGGCGA ACTGCCTGCT GCAACGCTCG
ACCGCGGCCG AGCTGGCCCT GGAGGACCTG CGCCGGGTGC TGCCGCCCGC CCCCGAGCAG
CAGGACATGC ACAGCGAGGC CGACGTCGTG CAGGCGTGCA TCGACATCTA CGGCGACCGC
ATCGACCGGG CCGAGGGCCT GGTCGCGCTG AGCCTGCAAC GCCGCGACGT GTACCGGCCG
TGGGTGGTCG CCGTCGCCGC CAACATCCAG AGCTTCTGCG ACATCCACTC CATGCGGTTC
GAGACGGCGC TGGCCCGCCA GCGCTGGGCC GCGCGCATCC ACCAGCGCAC CGTCGGCCCG
TTCGCCGCCG TCTACGGGCG GTGCTTCGCC GGCATCGCCG CCTTCGCCCA GCTCGACCTG
CCGGCCGCCC AGGGGCACCT GGCCGGCGCC GTCGAACTGG CCCGGACCTC GGCCGGCCGG
CGCTCGCACG CGGCTCAGCT GGCCAGCGCG CTGCTGGGCG AGCTGCTCTA CGAGCTGGGC
GAGATCGACC AGGCCGAGCG CCTTCTCGAA GAGAGCCGGG AGCTCGGCGC GGAGAGCGGG
GTGGTCGACT TCATGATCGC CAGCTACGCC GTGCTGGCCC GGATCCGGGC CAACCGGGGC
GCCGCCGTCG ACGCCGCCGA GCTGCTGGCC GAGGGGGTCA AGGTGGCCGA GCGGCTGGCC
CTGCCCCGGC TGCACGCGGC GGTGGCCAGC GAACGGATCC GGCAGCTGCT GCTGGCCCGC
CGGATCGCCG AGGCCCGCCG CGTCGCCGAG GCCATGCCGG ACGGGTCGAG CACCGAGGGC
GGCCTGGGGA TCACCATCGA CCAGATCCGC ACCGGGGCCC TGGCCGCCGT CATGTCCGCG
GAGGGCGACC GGGACGGCGC GGTGGCCCTG CTGGACGAAC TGATCGACGA CCTGCAGCGC
CGCGGCCAGT TCCGGGCCCG GCTGGCCGCC GCCGTGCAGC GCGTCGTCGT GCTCGAACAG
GCCGCCCACC GGATGGCCGC CGAACGTGCC CTGGCCGACC TGCTGGGGCA GGTCGTGGCC
ACCGGGCTGC GCCGCACCGT GCTCGACGGC GGACCCGACA TCGTGACCGT GCTCGACCGG
CTGCTCGCCC AGGCCGGCAC CCGCGCCTGG GCCAGGGCCC ATCCCGACGT GCCGCGGGAC
TGGTTGGCCG CTCTGGTCGC GCAGGCCGGC GACGACCCCG AGACGCCGAG CAGCGGCCTG
ACCGCGCGCG AGCTCGACAT CCTGCGGATG GTGGGCAGCG GCCGCACCAA CCAGCAGATC
GCCACGTCGC TGACGGTCAC CGTGAACACC GTCAAGTGGT ACCTCAAGAA CATCTACACC
AAGCTCGGCG CCACCAACCG CACCGAGGCC ACCGCCATCG CCCGGCGTGA GGGCCTGCCG
GTCTGA
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| Protein sequence | MPSTSAPSGS LHASTRFRAP TYVRNVIERE RLLDALGEGG GRALVVIHAP AGYGKTTLAV
QWLRVLADGG AVPAWLGLHR DDNDPHWFLF HLLEAVRRAV PAAGDVLGDL RDLLEQNVED
TQTYALSVLL EQIGRHDGRL VLTFDDWHLI EDAQVHRALV HLLDFAPPNL SVVLTSRVRP
RLPLSRLRVR GQLIEIDADT LRFDLAETRS FLVDLNGLRL EPEDIARVSV STDGWVAALQ
LVSLSLRDCA DPTDLIGGFS GRDHSIGEYL AENVLDALPG DILAFLLDTC VGDRLCGELA
DALSGRTDGQ AMLEELERRD LFLRPLDPER QWFRYHHLFA DYLRRRLERD QRDRVAGLHR
RAAQWFAAHD LVSEAVSHAL AAGDVAMATD LVERHAMAQV EHSRMVSLLG LIGRLPAAAV
SERPRLLMAL AWANCLLQRS TAAELALEDL RRVLPPAPEQ QDMHSEADVV QACIDIYGDR
IDRAEGLVAL SLQRRDVYRP WVVAVAANIQ SFCDIHSMRF ETALARQRWA ARIHQRTVGP
FAAVYGRCFA GIAAFAQLDL PAAQGHLAGA VELARTSAGR RSHAAQLASA LLGELLYELG
EIDQAERLLE ESRELGAESG VVDFMIASYA VLARIRANRG AAVDAAELLA EGVKVAERLA
LPRLHAAVAS ERIRQLLLAR RIAEARRVAE AMPDGSSTEG GLGITIDQIR TGALAAVMSA
EGDRDGAVAL LDELIDDLQR RGQFRARLAA AVQRVVVLEQ AAHRMAAERA LADLLGQVVA
TGLRRTVLDG GPDIVTVLDR LLAQAGTRAW ARAHPDVPRD WLAALVAQAG DDPETPSSGL
TARELDILRM VGSGRTNQQI ATSLTVTVNT VKWYLKNIYT KLGATNRTEA TAIARREGLP
V
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