| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00820 |
|---|
| Symbol | |
|---|
| ID | 8393974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 109157 |
|---|
| End bp | 110119 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644984855 |
|---|
| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| Protein accession | YP_003142505 |
|---|
| Protein GI | 257062833 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATA TCATGCTCTT CTACTATTCC CTCACAATCC TTCTGTCAAT CGCTTTGACT
TCCGCCATCA GCCTGTCGTC GTATTTCGTC ACCCGACGCA AGACGTTTCT GTATCTGACC
ATCACGTTCG TCGCCTATTT CTTCGATTGC TCGATTCCGT TCCAACACGA CTTTCTCACG
CCGCAGGTAA CGCTTGAGAC CCCTTCGTTC TGGGACATAA GCACGCCCTA CACGTTCCTT
ACGACCGGCG CCATCTTCCT TCAAGCGATG TGGCTTGCTG TATGTCAGTA CATCGACGAG
CGCCGACCTG CCGTGCGTTT CGGGCCTATC GTCGCATTCA TCGTTCTCAG CGTGGGCGCT
TTGGTGTTGA CCGACAATAT CCGTTGGCGT GAATTCCTGT ACTTCAATAC CCGCGAATTG
CTTTTGTTCT GGATGCTCGG ATACTTGGGC TATGTCTACA TCTCGCATCG AAACGACGCC
ATACACGACG CCCTTTCCCG ATACGTGCGC GCATACTTCG TTGCGCTGCT GCTGGTAGTC
GCCATCGTTG TTGAAAACGT CTATATCCAG CTGATTTTCG ACCCGGGCGA CATCCCCGAC
ACCGCATGGT TCTTCGCCGA AAGAAGCATT GCCGAAAACG CACTCATGCT CTACGTCGCT
TCTCACGTGT TCCGCACCTG TTGGAAAATG CTGTCGCTGC GGTTCGAACA GCCGCCCGAG
CGTTCCGACG CGCCCATGAG CGAATCCATC GACCGCGTTA TGCCGATGTA CGCCAAACGA
AACAACCTGT CCAAGCGCGA GACCGAAGTG TTGGCCCTCA TCGTCATGGG GAAAGACAAC
CAGAACATCG CGAGCGAAAT GACACTGTCC CTCAACACGG TGAAAGTGCA CGTACACAAC
ATACTGAAGA AGACCGGACA GCAGAATCGC CAGGCCCTGA TCAGGGACTT TTGGAAGAAC
TAG
|
|---|
| Protein sequence | MGYIMLFYYS LTILLSIALT SAISLSSYFV TRRKTFLYLT ITFVAYFFDC SIPFQHDFLT
PQVTLETPSF WDISTPYTFL TTGAIFLQAM WLAVCQYIDE RRPAVRFGPI VAFIVLSVGA
LVLTDNIRWR EFLYFNTREL LLFWMLGYLG YVYISHRNDA IHDALSRYVR AYFVALLLVV
AIVVENVYIQ LIFDPGDIPD TAWFFAERSI AENALMLYVA SHVFRTCWKM LSLRFEQPPE
RSDAPMSESI DRVMPMYAKR NNLSKRETEV LALIVMGKDN QNIASEMTLS LNTVKVHVHN
ILKKTGQQNR QALIRDFWKN
|
|---|
| |