Gene Pfl01_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0640 
Symbol 
ID3713556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp751742 
End bp752551 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_346373 
Protein GI77456868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAGCT TTGGCCCGGG CATGGAGTGG CACGTGAACA AGCTTACGTC GGCGGTAAAA 
GTCCTTGTGG TCGATGATCA GGCGCTGATC GTTGAAGAAC TCTGTGAGTT TCTTGAGAGC
AGCGGTTATC GCTGCGTGCC CTGTGAGTCC AGCAGCGAGG CGGTCACGCG TTTCAGTGAA
GACCCGGCCA TCGGCCTGGT GTTGTGCGAC CTGCACATGC CGGACATGGA CGGCATCGAG
CTGGTGCAGG CGCTGCAGGG GGTGTCCGGC AAGAGCCGGG CGTTCGAAGC AATCATGCTT
ACCGGCCGCG CCGACAAGCA GGATGTGATC AAGGCGTTGC GCGCGGGGAT TGCCGATTAC
TACCAGAAAC CGGTGGATCT GGATGAGTTG CTGGAGGGGT TGCGGCGTCA GGAAACGGTG
CTGCAGGAGC GGCAGAAGAC CCTGCAACTG GGGCACCTGA ATCAGAAGCT GCAGGATCTT
TCTTCGTCGA TCGATGATTT GTATCAGGAT CTGGACAAGG TTCGGCGCGG GCCTGCGCCG
GCTGCCCAGA CCGTGGCAGA GGGTGACAGT GCAGAGATAC CGGCGATTTT CGAGCAGTTG
TCGCCGCGCC AGCTCGATGT GGCCCGGCTG GTGGGCAAGG GGCAGACCAA TTATCAGATT
GCCTGTGAGT TGGGGATTAC CGAGAACACG GTGAAGTTGT ATGTGTCGCA GGTTTTGCGG
TTGACGCATA TGCATAATCG GACGCAGCTG GCGTTGGCTC TGGCGCCGGG GAGTTCTTCT
GCTGTTCGGC GGGGGGTTAC GGCGCATTGA
 
Protein sequence
MVSFGPGMEW HVNKLTSAVK VLVVDDQALI VEELCEFLES SGYRCVPCES SSEAVTRFSE 
DPAIGLVLCD LHMPDMDGIE LVQALQGVSG KSRAFEAIML TGRADKQDVI KALRAGIADY
YQKPVDLDEL LEGLRRQETV LQERQKTLQL GHLNQKLQDL SSSIDDLYQD LDKVRRGPAP
AAQTVAEGDS AEIPAIFEQL SPRQLDVARL VGKGQTNYQI ACELGITENT VKLYVSQVLR
LTHMHNRTQL ALALAPGSSS AVRRGVTAH