| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_3599 |
|---|
| Symbol | |
|---|
| ID | 6201520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 4077695 |
|---|
| End bp | 4078402 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641707553 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001834643 |
|---|
| Protein GI | 182680497 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.161431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTG CTTCCGTGAC ATTGCAGTCA ATCGAGAAAC CGGGTCTCCC ACTCGTGTCC
AAACCTCTCC CCAAAGGAAA GATTTTCATT GTTCATAGCG TGCCGCTGAT GCGCCTCGCT
ATCGAGACCA TCCTCAGCAA GGCCATGCCC TTGGCTGGTC ATGCCATTTT CAGCATGTCG
CATGCTGAAA ACGACAGCCT CGGTCAGGCT ACTTCTGGCG ATATCGTCAT TTGCGACATC
ACCACCTGGA CTGTGCTGGA AAAAGAAGCT GATTCCGCGC ACCAGCCCCA TCTTCACAAT
CGCGGGATCG CCGTGGCGAT CGTTGCTTCT CCGGATCAGA CCGGCACCCG CCTGCTCGAG
ACACGGGGTG TCTCTGGCGT CATCCATCCC GATGCTGAAC CGCAGGCCTT TATCGACATG
GCCGGCGATC TTCTGGCAGG CCGCCGCTCC ATTTCCAAAT CTCTCAATGC CGCTCCGCAT
GCCGCGGGCC TCGGTCGCCT TTCGAATCGC CAATTCGAAA TTCTCGAATT GATGACGAGA
GGCCTGCTCA ATAAGCAGAT TGCCTGGGAA CTTGGTCTGA CCGAGGGCAC CGTCAAGAGC
CATGTCTCGG CCATTTTAGA AAAACTCGGT TGCGACCGCC GCACTCAGGC GATCACTGCT
TTCATGCAGA GCCTTGGCGT TGGCCGTTCT TCCACGATCG CCGCCTAA
|
|---|
| Protein sequence | MNPASVTLQS IEKPGLPLVS KPLPKGKIFI VHSVPLMRLA IETILSKAMP LAGHAIFSMS
HAENDSLGQA TSGDIVICDI TTWTVLEKEA DSAHQPHLHN RGIAVAIVAS PDQTGTRLLE
TRGVSGVIHP DAEPQAFIDM AGDLLAGRRS ISKSLNAAPH AAGLGRLSNR QFEILELMTR
GLLNKQIAWE LGLTEGTVKS HVSAILEKLG CDRRTQAITA FMQSLGVGRS STIAA
|
|---|
| |