| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1558 |
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| Symbol | |
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| ID | 3682290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1917738 |
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| End bp | 1918460 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637716898 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_322076 |
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| Protein GI | 75907780 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.142258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA TCAGCATTAT TTTAATTGAA GATCATGACC TAACCAGAAT GGGGCTAAGA
GCTGCGTTAC AGGCCAACAC TGGCATCAAA GTAATAGGTG AAGCGGCTAA TGCCACTCAA
GGACTGAAAC TTTTGGAAAC GGCGAAGCCG GATGTAGCGG TGGTAGATAT TGGCTTGCCG
GACATGGATG GGATTGAACT CACTCGCAAG TTTAGGCGTT ATCAAGCTGA GAGTGGGCAA
ACCCACACCA AGATTTTGAT TCTGACAATG GATCATACCG AAGATGCAGT ACTGGCGGCT
TTTGCGGCTG GGGCAGACTC TTACTACATG AAAGAAACCA GCATTAGTAG GCTGACAGAA
GCAATTCAAG CGACTTTTGG CGGCAACTCA TGGATTGATC CAGCGATCGC TAATGTAGTA
TTACAGAAGA TGCGCCAAGG CATCCCCGGA GAGAGCCAAT CATCTGATAA GCCCAAAACC
GTCAAAATTG AGGCTCTACC TTCTGAATAC GAACAAGTAT TAGAAACCTA CCCCCTTACA
CAACGGGAAT TAGAAATTCT AGAGTTGATT GTTGCTGGCT GTAGCAACGG TCAAATTGCG
GAGAAACTTT ATATTACCGT TGGTACGGTT AAAACCCACG TCCGCAACAT TCTGAATAAA
CTCTGCGCTG ATGACCGTAC CCAAGCTGCT GTACGTGCTT TGCGTTCTGG CTTAGTAGCT
TAA
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| Protein sequence | MSEISIILIE DHDLTRMGLR AALQANTGIK VIGEAANATQ GLKLLETAKP DVAVVDIGLP
DMDGIELTRK FRRYQAESGQ THTKILILTM DHTEDAVLAA FAAGADSYYM KETSISRLTE
AIQATFGGNS WIDPAIANVV LQKMRQGIPG ESQSSDKPKT VKIEALPSEY EQVLETYPLT
QRELEILELI VAGCSNGQIA EKLYITVGTV KTHVRNILNK LCADDRTQAA VRALRSGLVA
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