| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4382 |
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| Symbol | |
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| ID | 4596900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4631768 |
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| End bp | 4634788 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639778992 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_925566 |
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| Protein GI | 119718601 |
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| COG category | [K] Transcription
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.172901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGC CCGCGCTGCG CCTGGTCCCG GGCGGCGATC CCTCCGCGAA TGCGCGGCAG
CTGTCTCCGG AACACGCGAT CATGGGCGAC GTGGCCGCAC ACACCAGCCG AACCCTGGTC
GGACGAGACG CCGAGCTGAC GGAGATCGCT TCGTTGCTCG GCGTCCGTCC GGCCGGCACC
GGCACCGGCC TGGTGCTGCT CTCCGGCGAC GCCGGCGTCG GCAAGACCCG GCTGCTCACC
GAGCTGCGCG ACCTGGCGTT CACCGAGGGC TGGCAGGTGG TCGCGGGCCA CTGCCTGGAC
TTCGGTGACA GCGCGCTGCC CTACCTGCCG TTCTCGGAGG TCCTCGGCCG GCTCGCCGCC
GACCTGCCGG ACCTCGTCGA GGAGGTCGCC GGCCGGCACT CCGCGCTCGC CCGCCTCCAG
CCGGGCCGCC GGGTGATGGG CTCCCCGGCG CGCTCGAGCG ACGACCTCGG CGCGCTCGAC
CGCAGCGACC TCTTCGAGGC CGTGCACGCG CTCCTCGAGT CGGCCGCCAC CTCGGCGCCG
CTGCTGCTGG TCATCGAGGA CACCCACTGG GCCGACCAGT CGACCCGCGA CATGCTCAGC
TTCCTGTTCA GCCGTCCGTT CGCGGGCCCG GTCTCGGTCG TGGCGTCGTA CCGCTCCGAC
GACCTGCACC GCCGGCACCC GCTGCGCCGC CAGGTCGCGG AGTGGTCCCG GATCCGCGGC
GTGCACCGGG TACCGCTCTC CCCGCTGTCC GACGACGCGG TCCGCGCCCT CATCGCCGAG
CTGGCCCCCG AGGGCCTGGC CGAGCGCGAG CTCGCCGACA TCGTCGACCG CGCCGAGGGC
AACGCGTTCT TCGTGGAGGA GCTCACCAGC GCCGCCGCCG GGCCGGGCCG CTGGGTCCCC
GCCGACCTCG CCGACGTGCT CCTGGTCCGC CTGGACCGGC TCGACGACAC CGCCCGGCAG
GTGGTCCGCA CGGCCAGCGT CTCGGGCCGC CGGGTCTCGC ACGAGACCCT GGCCGCGGCC
TCCGGGCTCG CCGACGCCGA GCTCGACGAG GGCCTGCGCA AGGCGGTCGA GATGAACATC
CTCGTCGCCG GGGACGGCCG CTACTCCTTC CGCCACGCGC TCCTCGGCGA GGCGGTGTAC
GACGACCTCC TGCCGGGCGA GCGGGTCCGG CTGCACGCCC AGTATGTCGC CGCCCTGCGG
GCCGGGGCGC GGGGCACGGC CGCGGAGCTG GCCCGCCACG CCCGGCTGGC GATGGACCTG
GACACCGCGC TGACCGCGAG CATCCAGGCC GGCGACGAGG CCTCGCGGGT CGGTGGCCCG
GACGAGGCGG CCTACCACTA CCAGCAAGCC CTCGAGCTGC TCGTCGACCC GCGCCGCTGC
GCGCAGGTCG ACCTCGACCT GTCCAAGCTC GTCGTCAGCG CCGCCGAGGC GCTCTCCGCC
AGCGGCGACC CCGAGCGCGC GGTCAAGGTG ATCGCCGACC AGGTCGAACG GCTCCCGGTG
GACGCGCCGA CGACCTGGCG GGCCCGGATG ATGTCGACCC AGGCGCTGCT GACGATGATG
ATCGAGGGCA GCGACGATCC GGTCGGGATG TCCACCGAGG CGGTCGCCCT GGTGCCCGAC
GGCGACAGCG GGCTGCGCAC CCGGGTGCTC GCCAACCACG CCCGGGTGCT GGCCGGGATG
GGCCAGTACG ACGAGGCCCA GACCGTCGGG CTGGACGCCC TCCACCTGGC AGAGCGGCTC
GACCTGCACG AGCTGGCCTC CGAGGTGATC ACCACCCTCA GCGGCCTCAA GAAGGCCGGC
CCGAAGGAGG GCCTGCGCCA AGCCCTCGCG GACGCGGTCG CCCGGGCCGA GGCGTCCGGG
GCGCTGTCCT CGGAGATGCG CGCCCGCTAC CTGCTGGGCC GCTCCTACCA GGACTGGGCG
GAGTTCGACG AGACCGAGCG CTGGTTCCGC AGCGCCATCG AGCGTGGCGC CGACGCCGGC
ATCCCGTACG CGCCGTACGC CTTCGAGGCC CGCTGGCAGC TGGCCTGGGT GCTGGTGGTC
CGCGGCCGCT GGGACGACGC ACTCGCGCTG ACCGACACCG GCCAGGACAC ACCGCCCCCC
GCGATCCCCC GGGCGCTGAT CGCGCCGCTG CGGATGCAGG TGCTCCAGGC GCGGGGTGAG
GACGTGCGCG CCGAAGCCCG GGCGCTGCGG AAGTTCTGGG CCCGGGAGGG TGGCGTGGCC
ATCAACGCCA GCGCGGTCGA GCTGGATGCG GCGGGCCTGC GCCGCGACGC CGCCGGCGCG
ATCGAGGTGT ACGACGCGGT CGTCGCCGTG CTCACCCGGA TCTGGCACGA GTGGTTCAGC
GCGCGGATCC GGCTGGGCGC GCTCACCATC GGCGCGGTCG CCCAGGCGAT GCCGGCGCTC
TCCGCCGCCG AGCGGGCGTC GTACGTCGGC CGCGTCGATC GGATCCACGC CGACGGGCAT
GTCGTGCTGC AGCGCTACTC CGACCCCTCC GGTCACTGGG GACCGGAGGG CCGTGCCTGG
ATGAAGCGGC TCGACGCGGA GACGCTGCGG GTCCGGTGGC TCGCCGGGAT CGACGCCCCG
CCGCTGGACG CGCTGGTGGA CACCTGGCGC GACGCCGCGG TGCTGTTCGA GGACTTCGGC
CACGCCTACG AGCTGGCCCG GGTGCGCACC GCCCTGGCCG GCATCCTCCG CGCCACCGGC
GACCTCGCCG GCGGCCGTGA GCTCGGCGAC CTGGCCCGCG CGAGCGCCCA CCAGCTGGGC
GCCCGGCCGC TGCTCGACGA GCTCCGCTCG ATCGGCAGCG CCCCGGCACG TACCGAGTCC
GTGCCGGACG CGCTGACCCC GCGCGAGAGC GAGGTCCTCC AGCTCGTCGC CCAGGGCCGG
TCCAACGGCG AGATCGCCAA GCAGCTGTTC ATCAGCGCGA AGACCGTCTC CGTGCACGTC
TCGAACATCC TCGGCAAGCT GGACGCCTCC GGGCGCACCG AGGCCGCCGC GATCGCCCGG
CGCCGGGGGC TGATCGGCTG A
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| Protein sequence | MTQPALRLVP GGDPSANARQ LSPEHAIMGD VAAHTSRTLV GRDAELTEIA SLLGVRPAGT
GTGLVLLSGD AGVGKTRLLT ELRDLAFTEG WQVVAGHCLD FGDSALPYLP FSEVLGRLAA
DLPDLVEEVA GRHSALARLQ PGRRVMGSPA RSSDDLGALD RSDLFEAVHA LLESAATSAP
LLLVIEDTHW ADQSTRDMLS FLFSRPFAGP VSVVASYRSD DLHRRHPLRR QVAEWSRIRG
VHRVPLSPLS DDAVRALIAE LAPEGLAERE LADIVDRAEG NAFFVEELTS AAAGPGRWVP
ADLADVLLVR LDRLDDTARQ VVRTASVSGR RVSHETLAAA SGLADAELDE GLRKAVEMNI
LVAGDGRYSF RHALLGEAVY DDLLPGERVR LHAQYVAALR AGARGTAAEL ARHARLAMDL
DTALTASIQA GDEASRVGGP DEAAYHYQQA LELLVDPRRC AQVDLDLSKL VVSAAEALSA
SGDPERAVKV IADQVERLPV DAPTTWRARM MSTQALLTMM IEGSDDPVGM STEAVALVPD
GDSGLRTRVL ANHARVLAGM GQYDEAQTVG LDALHLAERL DLHELASEVI TTLSGLKKAG
PKEGLRQALA DAVARAEASG ALSSEMRARY LLGRSYQDWA EFDETERWFR SAIERGADAG
IPYAPYAFEA RWQLAWVLVV RGRWDDALAL TDTGQDTPPP AIPRALIAPL RMQVLQARGE
DVRAEARALR KFWAREGGVA INASAVELDA AGLRRDAAGA IEVYDAVVAV LTRIWHEWFS
ARIRLGALTI GAVAQAMPAL SAAERASYVG RVDRIHADGH VVLQRYSDPS GHWGPEGRAW
MKRLDAETLR VRWLAGIDAP PLDALVDTWR DAAVLFEDFG HAYELARVRT ALAGILRATG
DLAGGRELGD LARASAHQLG ARPLLDELRS IGSAPARTES VPDALTPRES EVLQLVAQGR
SNGEIAKQLF ISAKTVSVHV SNILGKLDAS GRTEAAAIAR RRGLIG
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