Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3804 |
Symbol | |
ID | 7860543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 4222563 |
End bp | 4223213 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643867907 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002883808 |
Protein GI | 229822282 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.185264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCC TCCTCGTCGT CGACGACCAG ACCCTGGTGC GCCAGGGGAT CCGAGGGCTG CTCGAGCTCG CACCCGACGT CGACGTCGTC GCCGAGGCCG ACGACGGACT GGCCGGCCTC GCCGCCGTCC GCGAGCACGA CCCGGACGTC GTGCTGCTCG ACCTGCGCAT GCCCCGGCAC GACGGGCTGT GGCTGCTCGA GGCCCTGCGC GCCGGGGAGC TCGACGTGCC GGTGCTCGTC CTCACGACGT TCGACGACGA CGAGCTCGCC CTGGCGGCGA TCGCCGCCGG CGCACGCGGC TACCTGCTCA AGGACGTCAC GCTGGACTCC CTGGTCGACG CCGTGCGGAC GCTCGCCGGG GGCGGCACGC TCGTCCAGCC CGCGATCACC GAACGCGTGC TGCGGGCCGT GCGGGCCGGG TCCGTCCCGC TCGACGACGC CGCGGCGGGC GACGTCCAGG AGCTCACCAG CCGCGAGCTC GAGATCCTGC GCCTGCTCGC GGCCGGGTAC TCCAACCGGG AGATCGCCGA GGCGCTCCAT CTCGCCGAGG GGACCGTGAA GAACCACGTG TCGACGGTGC TGCTCAAGCT CGGCACGCGG GATCGCACGC GCGCCGTGCT CCGGGCGCTG CACCACGGCC TCCTGCGGTA G
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Protein sequence | MIRLLVVDDQ TLVRQGIRGL LELAPDVDVV AEADDGLAGL AAVREHDPDV VLLDLRMPRH DGLWLLEALR AGELDVPVLV LTTFDDDELA LAAIAAGARG YLLKDVTLDS LVDAVRTLAG GGTLVQPAIT ERVLRAVRAG SVPLDDAAAG DVQELTSREL EILRLLAAGY SNREIAEALH LAEGTVKNHV STVLLKLGTR DRTRAVLRAL HHGLLR
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