| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4781 |
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| Symbol | |
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| ID | 6179703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1917382 |
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| End bp | 1918065 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684540 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001811451 |
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| Protein GI | 172063800 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0502492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGTTC TAATGATCGA TAGCCCGCCG TTATTCGTCG CGGGTGTGGC GGACGTACTG
TGTAAACGCG ATGTCAACTG GCATGTGTGG TCGGCTCGCT GTCCCGAGGA CGTCTTGCGC
CTGCGCGATG CGTTGCTGCC CGAGACGGTG GAGGCAATCA CGATCGAATG CGACGAGCAC
GCCGCGCGGC CGAGCTGGCC GAACGTGCTG CACGAGACGT TCGCCGGCGC GCCGTGGCTG
TGCGTGGCGA CGGCCGTGTG CCGCCGCACG ATTGCCGATG CGCTGCTGGC GGGGGCCGCC
GGCATCATCG ACCGGCACGC GAGCGCCGAC GAGTTCGCGG ATGCGCTAGG CCGGGTGGCG
GCCGGCGCGA TCTACGTGCC GCCGAACGAC GGCGGCGCGA CGCAGGCGCG CCCGGGCGGC
CTGCCGGCCG GCGACGATCG TGCGTTCGAG CGCCTCACGC CGCGCCAGCG CGACGTGCTG
CGCCTGTTGG CCGAAGGCAA GTCGAACAAG CAGATCTGCC GCGTGCTGAA CGTCGCGGAG
GGCACGATCA AGAATCATCT GTATGCGCTG TTTCGCCAGA TCGGCGTGAG CAACCGGACC
GAGGCCGCAT TGTGGCTCGC GCGCCACGTG TCGTCCGATT CATCCGGCTT CCCGTTTGCG
CCGGCCTGCC ATGCGCCCGG CTGA
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| Protein sequence | MNVLMIDSPP LFVAGVADVL CKRDVNWHVW SARCPEDVLR LRDALLPETV EAITIECDEH
AARPSWPNVL HETFAGAPWL CVATAVCRRT IADALLAGAA GIIDRHASAD EFADALGRVA
AGAIYVPPND GGATQARPGG LPAGDDRAFE RLTPRQRDVL RLLAEGKSNK QICRVLNVAE
GTIKNHLYAL FRQIGVSNRT EAALWLARHV SSDSSGFPFA PACHAPG
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