More than 300 homologs were found in PanDaTox collection
for query gene Mboo_2336 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_2336  response regulator receiver protein  100 
 
 
355 aa  721    Candidatus Methanoregula boonei 6A8  Archaea  normal  0.404573  normal  0.642469 
 
 
-
 
NC_009712  Mboo_2407  response regulator receiver protein  59.85 
 
 
182 aa  160  4e-38  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  46.83 
 
 
258 aa  129  9.000000000000001e-29  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  48.78 
 
 
352 aa  124  3e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  42.4 
 
 
461 aa  109  7.000000000000001e-23  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_014230  CA2559_08681  transcriptional regulator  40.48 
 
 
240 aa  105  2e-21  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.803849  n/a   
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  40.34 
 
 
135 aa  100  5e-20  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  39.5 
 
 
238 aa  99.8  6e-20  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  42.15 
 
 
143 aa  99.8  7e-20  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  40.16 
 
 
989 aa  99  1e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1360  putative PAS/PAC sensor protein  40.5 
 
 
429 aa  99  1e-19  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00110028  hitchhiker  0.000665614 
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  41.27 
 
 
404 aa  98.2  2e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  40.98 
 
 
989 aa  97.4  3e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  40.65 
 
 
255 aa  97.8  3e-19  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  41.48 
 
 
373 aa  97.4  3e-19  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011832  Mpal_0573  response regulator receiver protein  40.8 
 
 
261 aa  96.7  6e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.666159  normal  0.332219 
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  42.15 
 
 
316 aa  95.5  1e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  39.85 
 
 
701 aa  94.7  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_007796  Mhun_0118  putative PAS/PAC sensor protein  35.04 
 
 
265 aa  94  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  41.53 
 
 
340 aa  93.2  6e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  38.06 
 
 
384 aa  92.4  1e-17  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_007955  Mbur_0834  response regulator receiver  40.5 
 
 
134 aa  92.4  1e-17  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000017528  n/a   
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  40.5 
 
 
953 aa  92.4  1e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3003  PAS/PAC sensor hybrid histidine kinase  39.67 
 
 
498 aa  91.7  2e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2639  multi-sensor hybrid histidine kinase  37.7 
 
 
817 aa  91.7  2e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  39.67 
 
 
603 aa  91.7  2e-17  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  40 
 
 
359 aa  90.9  3e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  39.67 
 
 
355 aa  90.5  4e-17  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  37.19 
 
 
386 aa  90.5  4e-17  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  40.34 
 
 
257 aa  90.1  5e-17  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1912  response regulator receiver protein  38.14 
 
 
263 aa  90.1  6e-17  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.181503  normal  0.732361 
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  39.67 
 
 
131 aa  90.1  6e-17  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  36.51 
 
 
130 aa  89.7  8e-17  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  38.1 
 
 
701 aa  89.4  9e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  38.33 
 
 
704 aa  89  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  42.5 
 
 
455 aa  88.6  2e-16  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009712  Mboo_2032  response regulator receiver protein  39.32 
 
 
387 aa  88.2  2e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0686114 
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  36.36 
 
 
591 aa  88.6  2e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  42.02 
 
 
336 aa  87.8  3e-16  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4302  signal transduction histidine kinase  37.82 
 
 
343 aa  87.4  3e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.219335  normal  0.321802 
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  38.02 
 
 
352 aa  87  4e-16  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1725  multi-sensor signal transduction histidine kinase  36.22 
 
 
499 aa  86.7  5e-16  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  35.54 
 
 
472 aa  86.3  7e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  42.15 
 
 
455 aa  86.3  8e-16  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  38.98 
 
 
380 aa  85.9  0.000000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  35.11 
 
 
337 aa  85.9  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  41.03 
 
 
126 aa  85.9  0.000000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  33.61 
 
 
426 aa  84.7  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  35.61 
 
 
636 aa  83.6  0.000000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  38.02 
 
 
474 aa  83.6  0.000000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  35.25 
 
 
376 aa  82  0.00000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  32.77 
 
 
429 aa  82.4  0.00000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  39.17 
 
 
450 aa  82.4  0.00000000000001  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  36.36 
 
 
377 aa  81.6  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  37.01 
 
 
561 aa  81.6  0.00000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  37.82 
 
 
245 aa  80.9  0.00000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  38.1 
 
 
194 aa  80.9  0.00000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_011769  DvMF_1374  putative PAS/PAC sensor protein  37.9 
 
 
408 aa  81.3  0.00000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007955  Mbur_0883  response regulator receiver  37.21 
 
 
273 aa  81.3  0.00000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  38.33 
 
 
450 aa  79.3  0.00000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_013730  Slin_3427  two component transcriptional regulator, LytTR family  41.8 
 
 
256 aa  79  0.0000000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.239231  normal 
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  33.62 
 
 
122 aa  78.2  0.0000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_007413  Ava_4326  PAS/PAC sensor hybrid histidine kinase  36.07 
 
 
571 aa  77.8  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  36.59 
 
 
458 aa  77.8  0.0000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1517  response regulator receiver protein  37.07 
 
 
127 aa  77  0.0000000000005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.394491  normal  0.160821 
 
 
-
 
NC_009712  Mboo_1007  putative GAF sensor protein  36.8 
 
 
311 aa  75.9  0.000000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164021  normal  0.860345 
 
 
-
 
NC_013132  Cpin_4365  two component, sigma54 specific, transcriptional regulator, Fis family  34.17 
 
 
471 aa  75.5  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.231326 
 
 
-
 
NC_009338  Mflv_0999  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  38.17 
 
 
872 aa  75.5  0.000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_4330  response regulator receiver protein  32.26 
 
 
127 aa  74.3  0.000000000003  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  37.3 
 
 
196 aa  74.3  0.000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1200  response regulator receiver domain-containing protein  29.71 
 
 
248 aa  73.9  0.000000000003  Methanospirillum hungatei JF-1  Archaea  normal  0.0783054  normal  0.0763711 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  37.19 
 
 
196 aa  74.3  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2052  putative PAS/PAC sensor protein  27.06 
 
 
414 aa  74.3  0.000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  0.948346  normal 
 
 
-
 
NC_007955  Mbur_2294  response regulator receiver  33.94 
 
 
134 aa  73.9  0.000000000004  Methanococcoides burtonii DSM 6242  Archaea  normal  0.371138  n/a   
 
 
-
 
NC_013132  Cpin_1348  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
461 aa  73.9  0.000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01100  sensory box/GGDEF family protein  35.29 
 
 
798 aa  73.9  0.000000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2510  transcriptional regulator  31.4 
 
 
157 aa  72.8  0.000000000008  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000843612  normal  0.354799 
 
 
-
 
NC_013730  Slin_3671  Sigma 54 interacting domain protein  35.77 
 
 
657 aa  72  0.00000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_1441  LytTR family two component transcriptional regulator  35.48 
 
 
248 aa  72  0.00000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5460  sigma54 specific transcriptional regulator, Fis family  36.43 
 
 
650 aa  71.6  0.00000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.665291  normal  0.225769 
 
 
-
 
NC_007575  Suden_0616  two component transcriptional regulator  33.05 
 
 
249 aa  70.5  0.00000000004  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_1630  two component transcriptional regulator, LytTR family  38.4 
 
 
243 aa  70.5  0.00000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.192215 
 
 
-
 
NC_013132  Cpin_6068  response regulator receiver protein  35.77 
 
 
248 aa  70.1  0.00000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  37.69 
 
 
218 aa  70.1  0.00000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4853  two component, sigma54 specific, transcriptional regulator, Fis family  33.05 
 
 
457 aa  70.1  0.00000000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.231814  hitchhiker  0.00735887 
 
 
-
 
NC_007796  Mhun_2576  response regulator receiver domain-containing protein  31.67 
 
 
122 aa  68.9  0.0000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06763  transcriptional regulatory protein CpxR  34.21 
 
 
221 aa  68.9  0.0000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_0268  sigma54 specific transcriptional regulator, Fis family  32.23 
 
 
651 aa  68.2  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3510  PAS/PAC sensor hybrid histidine kinase  35.34 
 
 
521 aa  68.6  0.0000000002  Polaromonas sp. JS666  Bacteria  normal  normal  0.269968 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  36.97 
 
 
197 aa  67.8  0.0000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013422  Hneap_0207  two component transcriptional regulator, winged helix family  32.82 
 
 
262 aa  67  0.0000000005  Halothiobacillus neapolitanus c2  Bacteria  decreased coverage  0.00814931  n/a   
 
 
-
 
NC_013946  Mrub_2805  two component transcriptional regulator, winged helix family  35 
 
 
224 aa  67  0.0000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.244907 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  31.93 
 
 
194 aa  66.6  0.0000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  31.16 
 
 
229 aa  66.6  0.0000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  33.86 
 
 
204 aa  66.6  0.0000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_00535  Transcriptional regulatory protein CpxR  32.58 
 
 
247 aa  66.6  0.0000000007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.774728  n/a   
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  31.54 
 
 
199 aa  66.2  0.0000000008  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  36.89 
 
 
303 aa  66.2  0.0000000008  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_007519  Dde_3002  putative PAS/PAC sensor protein  36.67 
 
 
469 aa  65.5  0.000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.345319  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  36.8 
 
 
441 aa  65.9  0.000000001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>