| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2035 |
|---|
| Symbol | |
|---|
| ID | 5675689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 2446605 |
|---|
| End bp | 2447204 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641240957 |
|---|
| Product | response regulator receiver/ANTAR domain-containing protein |
|---|
| Protein accession | YP_001506378 |
|---|
| Protein GI | 158313870 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.480822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC CTTCCTCGAC GCCGCGTCGG GTGTTGATCG CTGAGGACGA AGCGTTGATC
CGGCTGGACC TCAGGGAGAT GCTCCAGGAG GAGGGCTACG AGGTCGTAGG TGAGGCGGGG
GACGGCGAGA CCGCCGTGGC CCTCGCGGGG AAGCTGCGCC CCGACCTCGT GATCCTGGAC
GTCAAGATGC CGAAGATGGA CGGCATCGAC GCGGGCGCGC GGATCGCCAA GGAGCGCATC
GCCCCGGTGG TCATCCTCAC CGCGTTCAGC CAGCGCGAGC TCGTGGAGCG GGCGCGCGAG
GCGGGGGCCA TGGCGTACGT GGTCAAGCCG TTCCAGAAGA AGGACCTGCT CCCGACCATC
GAGATGGCGA TGAGCCGGTT CACCGAGATC GTCAGCCTCG AGGCCGAGGT CGAGGATCTG
CAGGGGCGCC TGGAGGCTCG CAAGATCATC GAGCGGGCCA AGGGCGTGCT GCAGACCGAG
CACGGGATGA CCGAGCCGGA CGCGTTCCGC TGGATCCAGC GGACGTCGAT GAACCAGCGC
CGGACGATGC GCGCCGTCGC GGAGGCTGTG CTCTCCGGTG AGGCGCTGCC CAGCTCGTGA
|
|---|
| Protein sequence | MSQPSSTPRR VLIAEDEALI RLDLREMLQE EGYEVVGEAG DGETAVALAG KLRPDLVILD
VKMPKMDGID AGARIAKERI APVVILTAFS QRELVERARE AGAMAYVVKP FQKKDLLPTI
EMAMSRFTEI VSLEAEVEDL QGRLEARKII ERAKGVLQTE HGMTEPDAFR WIQRTSMNQR
RTMRAVAEAV LSGEALPSS
|
|---|
| |