| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0268 |
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| Symbol | |
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| ID | 8356373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 316957 |
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| End bp | 318912 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644962415 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003119969 |
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| Protein GI | 256419316 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA AAGTACTGAT AGTAGAAGAC GAATTCATTG TAGCCAGTAA TTTGAAGCAG
GTATTAGAGC GATCAGGCTA TGAAGTAATT GGTATTGCTG CTTCTGCCCA GGAAGCAGAG
GAGCATTTAC AGCGGGACAA GCCTGATATT GTATTGCTTG ATATCCGTTT ACAGGGAGAA
CGTTCCGGTA TCGATATTGC CAGGAAATTA AAATCCGAAC ATATAGCATT TGTCTATTTG
TCTGCCAATT CAAACCAGAA AATATTAGAG GAGGCAAAGA TGACCTATCC TGACGGGTTT
CTGGTTAAGC CATACAGAAA AAAAGACCTG CTGATTATGC TCGATATTGC CTGGTATCGC
CATGCGCATA GTCTCGAGAC AAAAAACAAC CAGGAAATAC ATGTACAGAA ACAGATAACG
GAAATAATTA CTGAAAATTC GGATAACCAG CAAAAGTTGC TGAAGATCGC GGAGATCATG
CAAACCTGTG TACCGTTCGA TCTTATCACA TCCGGACTAA GGCCGCTTAA TACAGGCCAG
TACAACGACA AAGGATATCT GCGTGTTGGA TTCGACGAGT ACCAGTTTAT TGGTGAAAAA
GAACTGCTTA CAATCACTAA TCTGAAGAGG CCAGCGCTAT CCGTCATCCT GGCAAACAGC
CATCTGGATA TAAATACGAA CATTTATAAC AATGACCCTG TCAATGAAAA ACCGAATGTA
CCATCACTGC AAAAAACATT GATTGATACG TTTAATATTC AATCTTATCT CGTATTTCCG
GTTGTACTGA GCAATGGACA ATCTTTTCAC TACTTCTTTT ACAGTCGCCA AAAGAATATT
TACACGAATA TTCACATATC CTTACTGGAC AATTTGAGAA CGGGTCTGGC AACATTAGCC
GAAAAAATGA TTTACGGAGA AAATCTGGCC ATTTCTAAAA ATACGCCTGT TCACTATGAA
AGAAAACTAC AGGGAAACAC ACTGAATTAC CCCGAATTCC GGAGCATCAT CGGCAACCAT
CATTTGTTGC TGGGAGCACT GGACCTTGCT GCACAGGTAG CGTTTTATAA TACATCCGTA
TTAATCCTTG GCGAAAGCGG CACCGGGAAA GAAAAGCTGG CACAGGCTAT TCATTTATTG
TCGCCAAGAA AAAATGCACC CTTTATCACA GTAAACTGCG CAGCCATTCC GGTTGCACTT
ATAGAATCGG AATTATTCGG TCACGAAAAA GGCGCATTTA CCGGTGCTAT AGAGAAAAGA
AAAGGTAAGT TCGAACAAGC TGATGGTGGA ACTATTTTCT TAGATGAGAT CGGGGAATTG
TCTCCGGAGA TGCAGGTGAA AATTCTACGC TTTTTACAGG AAAAGGAAAT TCAATGTATT
GGCGGCAACT CACTTACAAA AGTAAATGTG CGCGTAATAG CCGCTACCAA CCGTAACCTT
GAGAAAGAGG TCGCTGCGGA AAACTTCCGG CTTGACCTAT ATTACCGCAT TAATGTTTTC
CCTATTACAC TACCGTCATT GCGGGAACGT AGAAGTGATA TCAAAGAATT GTCCATTTAT
TTTGCGGAAA AATTCTGTAG TGAATTTAAT AAACCCTTTC ATGGCATTGT CACCTCCATG
ATGGAAGAAA TGATTGCTTA TGACTGGCCG GGGAATATCC GGGAACTGGA GAATGTTATA
GAACAGTCGG CCATTCTAAA TGATGGCAAG TCAAAATTAG AGCTGAAACG AACACTTACA
GGGAAGGCCA CAATACCTGT CACAACACCA ATTAAAACGT TTGAAGATGT GAAAAACATC
CAGGCTGAAA CAGAACGGGA ATATATCATT TCAGTACTCA AACAGGCGGA TGGCCGCGTT
CGTGGCGCCA ATGGCGCCGC TCAGTTAATG AATATCAAAC CTACCACGCT GGAATCCAAA
ATGGCAAAGC TGAAAATCAG ACGGGAAGAT CTGTAG
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| Protein sequence | MTKKVLIVED EFIVASNLKQ VLERSGYEVI GIAASAQEAE EHLQRDKPDI VLLDIRLQGE
RSGIDIARKL KSEHIAFVYL SANSNQKILE EAKMTYPDGF LVKPYRKKDL LIMLDIAWYR
HAHSLETKNN QEIHVQKQIT EIITENSDNQ QKLLKIAEIM QTCVPFDLIT SGLRPLNTGQ
YNDKGYLRVG FDEYQFIGEK ELLTITNLKR PALSVILANS HLDINTNIYN NDPVNEKPNV
PSLQKTLIDT FNIQSYLVFP VVLSNGQSFH YFFYSRQKNI YTNIHISLLD NLRTGLATLA
EKMIYGENLA ISKNTPVHYE RKLQGNTLNY PEFRSIIGNH HLLLGALDLA AQVAFYNTSV
LILGESGTGK EKLAQAIHLL SPRKNAPFIT VNCAAIPVAL IESELFGHEK GAFTGAIEKR
KGKFEQADGG TIFLDEIGEL SPEMQVKILR FLQEKEIQCI GGNSLTKVNV RVIAATNRNL
EKEVAAENFR LDLYYRINVF PITLPSLRER RSDIKELSIY FAEKFCSEFN KPFHGIVTSM
MEEMIAYDWP GNIRELENVI EQSAILNDGK SKLELKRTLT GKATIPVTTP IKTFEDVKNI
QAETEREYII SVLKQADGRV RGANGAAQLM NIKPTTLESK MAKLKIRRED L
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