Gene Mbar_A3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3448 
Symbol 
ID3624885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4421132 
End bp4421563 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content40% 
IMG OID637702277 
Productputative transcriptional regulator 
Protein accessionYP_306901 
Protein GI73670886 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.132297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0606491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CAAAAATTCT GGTTGTCGAA GACCAGAATA TAGTGGCTCT TAATATCAGA 
AACAAACTGA AAAATCTTGG TTATACCGTG CCAGGCACTG CATCCACAGG AGAGGAAGCA
ATAAGAAAAG CAGAGTTGAC GAATGCAGAC CTTGTTTTGA TGGATATCAT GTTAAAAGGT
GAAATGGACG GGATTGAGGC TGCCCGTGAA ATTAAAAACC GGCTCAGGAT TCCAGTACTA
TATCTTACCG CCTATACTGA TGACGAAACT CTTGAGAGGG CAAAAACAAC AGAGCCTGCA
GGATATATCT CAAAACCTTT TAAAGAAGAG GATCTGCATA GCAATATCGA AATGGCACTT
CACAAGCACA GAGCCAAAAA AAAAGAAGCT GAAAAAGAAG CTGGAAAAGA AAATGAAATG
ACTCCTGAGT AA
 
Protein sequence
MKKAKILVVE DQNIVALNIR NKLKNLGYTV PGTASTGEEA IRKAELTNAD LVLMDIMLKG 
EMDGIEAARE IKNRLRIPVL YLTAYTDDET LERAKTTEPA GYISKPFKEE DLHSNIEMAL
HKHRAKKKEA EKEAGKENEM TPE