Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3448 |
Symbol | |
ID | 3624885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4421132 |
End bp | 4421563 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637702277 |
Product | putative transcriptional regulator |
Protein accession | YP_306901 |
Protein GI | 73670886 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.132297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0606491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAG CAAAAATTCT GGTTGTCGAA GACCAGAATA TAGTGGCTCT TAATATCAGA AACAAACTGA AAAATCTTGG TTATACCGTG CCAGGCACTG CATCCACAGG AGAGGAAGCA ATAAGAAAAG CAGAGTTGAC GAATGCAGAC CTTGTTTTGA TGGATATCAT GTTAAAAGGT GAAATGGACG GGATTGAGGC TGCCCGTGAA ATTAAAAACC GGCTCAGGAT TCCAGTACTA TATCTTACCG CCTATACTGA TGACGAAACT CTTGAGAGGG CAAAAACAAC AGAGCCTGCA GGATATATCT CAAAACCTTT TAAAGAAGAG GATCTGCATA GCAATATCGA AATGGCACTT CACAAGCACA GAGCCAAAAA AAAAGAAGCT GAAAAAGAAG CTGGAAAAGA AAATGAAATG ACTCCTGAGT AA
|
Protein sequence | MKKAKILVVE DQNIVALNIR NKLKNLGYTV PGTASTGEEA IRKAELTNAD LVLMDIMLKG EMDGIEAARE IKNRLRIPVL YLTAYTDDET LERAKTTEPA GYISKPFKEE DLHSNIEMAL HKHRAKKKEA EKEAGKENEM TPE
|
| |