Gene Ava_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0066 
Symbol 
ID3683478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp87086 
End bp88219 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content39% 
IMG OID637715393 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_320587 
Protein GI75906291 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.359193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0132857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTA TCCAAATTTT GATAGTTGAA GATGAGCAAT TAGTGGCTGA TGACTTGAGA 
GAAACTTTAG AACATTTGGG GTATGGTGTA CCTGCCTTAG TAGCATCGGG AGAAGAAGCT
ATTTTCATGG CAGGAAATTT GCGACCTGAC TTAGTGCTGA TGGACATCAG ACTAGAGGGT
AAAATTGATG GTATAGAAGC CTCTTTTGCC ATCCAGTCTC GCTTCGATTT ACCAGTAGTT
TACCTAACTG CTAATGCCGA TCGCGCAACA CTAGAGCGAG CTAAGGCTTC CCATCCTTTT
GGGTATATTT TAAAACCCTT CGATGAAAGA ATATTAGCTA CCACAATAGA GATTGCTATT
TCCCGGCACC AAACAGAAGT TGAAGTAAAA AAAGCACTAA TTGCTGCTAA AAATAGTCAG
CAAATCGCTG AATCCAAAAA CCAGATGAAA TCACAACACC TCTACATGGC AGCACATGAG
TTTCGTAATC CTTTAACGAC AATTAAGCTC AGTGCCGAAA TGTTGAATAC CTATGGCAAA
CAGATGTCAG AGGAAAAAAA ACAAAAACAT ATCGATCGCA TTGAATCTGC CACGGATAGC
TTGACGAATC TGCTAGAAAA TATACTCACA CTTGGTAGAG CCGAAGCTGA CAATTTTGTA
TTGAACCCCA CTTTGATCGA GGTAGTAAGT TTCTGTGAAG AAATAGTCGA GTCTTTACGA
TTGACATTGA AAGAACATTA TGAAATTAGT TTTGTCACAA ATACTCAAAG CTTTATTGCC
TGCTTAGATG AACAGCTACT ATGGCATTTA CTCAATAACT TACTTTCTAA CGCAGTCAAA
TACTCCCCTA GAGGTAGTAC TATTTTGCTG GGGCTGACTT GTGACGAAAG TAGTGTGTAT
TTTCAAATTA AAGATCAAGG CGTAGGTATT CCCCTAGAAT TTCAAGCTAA ACTATTTGAA
CCTTTTCAAC GTGCTGCCAA TGTTGCCACA ATTCCCGGCA CCGGACTAGG GCTAGCAATT
GTTAAGCAAT GTGTTGATTT GCATCAGGGT AAAATATCTA TTGATAGTAC CTTAGGTCAA
GGAACAAGTT TCTTAGTTAG ACTACCATTG AAGGTAAATT CAATATCAGC TTAA
 
Protein sequence
MNPIQILIVE DEQLVADDLR ETLEHLGYGV PALVASGEEA IFMAGNLRPD LVLMDIRLEG 
KIDGIEASFA IQSRFDLPVV YLTANADRAT LERAKASHPF GYILKPFDER ILATTIEIAI
SRHQTEVEVK KALIAAKNSQ QIAESKNQMK SQHLYMAAHE FRNPLTTIKL SAEMLNTYGK
QMSEEKKQKH IDRIESATDS LTNLLENILT LGRAEADNFV LNPTLIEVVS FCEEIVESLR
LTLKEHYEIS FVTNTQSFIA CLDEQLLWHL LNNLLSNAVK YSPRGSTILL GLTCDESSVY
FQIKDQGVGI PLEFQAKLFE PFQRAANVAT IPGTGLGLAI VKQCVDLHQG KISIDSTLGQ
GTSFLVRLPL KVNSISA