Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0066 |
Symbol | |
ID | 3683478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 87086 |
End bp | 88219 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637715393 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_320587 |
Protein GI | 75906291 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.359193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0132857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCTA TCCAAATTTT GATAGTTGAA GATGAGCAAT TAGTGGCTGA TGACTTGAGA GAAACTTTAG AACATTTGGG GTATGGTGTA CCTGCCTTAG TAGCATCGGG AGAAGAAGCT ATTTTCATGG CAGGAAATTT GCGACCTGAC TTAGTGCTGA TGGACATCAG ACTAGAGGGT AAAATTGATG GTATAGAAGC CTCTTTTGCC ATCCAGTCTC GCTTCGATTT ACCAGTAGTT TACCTAACTG CTAATGCCGA TCGCGCAACA CTAGAGCGAG CTAAGGCTTC CCATCCTTTT GGGTATATTT TAAAACCCTT CGATGAAAGA ATATTAGCTA CCACAATAGA GATTGCTATT TCCCGGCACC AAACAGAAGT TGAAGTAAAA AAAGCACTAA TTGCTGCTAA AAATAGTCAG CAAATCGCTG AATCCAAAAA CCAGATGAAA TCACAACACC TCTACATGGC AGCACATGAG TTTCGTAATC CTTTAACGAC AATTAAGCTC AGTGCCGAAA TGTTGAATAC CTATGGCAAA CAGATGTCAG AGGAAAAAAA ACAAAAACAT ATCGATCGCA TTGAATCTGC CACGGATAGC TTGACGAATC TGCTAGAAAA TATACTCACA CTTGGTAGAG CCGAAGCTGA CAATTTTGTA TTGAACCCCA CTTTGATCGA GGTAGTAAGT TTCTGTGAAG AAATAGTCGA GTCTTTACGA TTGACATTGA AAGAACATTA TGAAATTAGT TTTGTCACAA ATACTCAAAG CTTTATTGCC TGCTTAGATG AACAGCTACT ATGGCATTTA CTCAATAACT TACTTTCTAA CGCAGTCAAA TACTCCCCTA GAGGTAGTAC TATTTTGCTG GGGCTGACTT GTGACGAAAG TAGTGTGTAT TTTCAAATTA AAGATCAAGG CGTAGGTATT CCCCTAGAAT TTCAAGCTAA ACTATTTGAA CCTTTTCAAC GTGCTGCCAA TGTTGCCACA ATTCCCGGCA CCGGACTAGG GCTAGCAATT GTTAAGCAAT GTGTTGATTT GCATCAGGGT AAAATATCTA TTGATAGTAC CTTAGGTCAA GGAACAAGTT TCTTAGTTAG ACTACCATTG AAGGTAAATT CAATATCAGC TTAA
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Protein sequence | MNPIQILIVE DEQLVADDLR ETLEHLGYGV PALVASGEEA IFMAGNLRPD LVLMDIRLEG KIDGIEASFA IQSRFDLPVV YLTANADRAT LERAKASHPF GYILKPFDER ILATTIEIAI SRHQTEVEVK KALIAAKNSQ QIAESKNQMK SQHLYMAAHE FRNPLTTIKL SAEMLNTYGK QMSEEKKQKH IDRIESATDS LTNLLENILT LGRAEADNFV LNPTLIEVVS FCEEIVESLR LTLKEHYEIS FVTNTQSFIA CLDEQLLWHL LNNLLSNAVK YSPRGSTILL GLTCDESSVY FQIKDQGVGI PLEFQAKLFE PFQRAANVAT IPGTGLGLAI VKQCVDLHQG KISIDSTLGQ GTSFLVRLPL KVNSISA
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