| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_0428 |
|---|
| Symbol | |
|---|
| ID | 7103379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 430792 |
|---|
| End bp | 432159 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643473538 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
|---|
| Protein accession | YP_002370681 |
|---|
| Protein GI | 218245310 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTA ATATCTTAAT AGTTGAAGAT GAAAGTATTG TAGCCCAAGA TCTTCAGATG
ACCTTAGAAG AGTTGGGATA TGAAGTCTGT GCGATCGCAG ATTCAGGAGA ATTAGCCATT
GAAAAAGCTA CCACCTTTAA ACCGGATTTA ATTCTCATGG ATATCCGCTT AATTGGTGAA
ATGGATGGTA TTGAAGCAGC CGGAATCATT GTTAAAAATT GGAATATTCC GATTGTTTAT
TTAACAGCCC ATGGAGATGA AGAAACCGTA GCAAGGGCAA AATTAACCAA TCCCTATGGC
TATTTAATTA AACCTTTTGT TGAACAAGAT TTGCGTATTA CCCTAGAAAT TGCCCTGTAT
AAACATCAAA TTCAACAAAC ACTGATTGAA TACAAACAAT GGTTATTTAC AATTTTACAA
AGTGTCGGAG ATGGAGTACT AACCACAGAT ATTCATGGTC AAATAACCTA TCTTAATCCC
ATGGCAGAAC ACTTAACGGG ATGGTCTTTA GCAGAAGCCA GGGGAAAACC CGTCACGGAA
GTCTTTAAAC TGATTGATGA AGTGACTCGT CAACCGATTG AATCTCCTAT TACAAAAGCC
CTAGAAATCC GTCAAATCAA AAACTTACCA GACAATACAG TCTTAATCAC AAAAGATCAA
CAAGAAATTC CTATCGGCGA TAGTATTGCC TTAATTTATG AAGATAAGGA CATAATTTCT
CTGAAGAAGC AAAAATCTCA ATGTATGGGA GTCGTTGTTA TCTTTCGGGA CATCACGGAA
CAGAAGTTAA TGAATCAAAA ACTTCATCGA CAGGCGTTTT ATGATCCCCT AACTAATTTG
CCTAACCGTC GCTGGTTTTA TGAACGCTTA ATTGATGCTA TTGAACGAGT TAAACGCAAT
CCAACTTATT TATTTGCTGT ATTATTTTTA GACTTGGATC GCTTTAAAGT TATTAATGAT
AGTTTAGGCC ATCCTATAGG TGATCGCCTG TTAACTTCTG TTGCCAGTCG TTTAAGGAAT
GTTTTACGTT CTATTGATAC GATTTCTCGT TTTGGAGGCG ATGAATTTGC TATTCTTCTT
GAAAATATTC ATTCCTCTGA AGAAGCGATT CAAATTGCCC AACGAATTCA TAAAATCCTA
CAAGTTCCTT TTTTAATTGA TGGGAAAGAA GTCTTGACTA ATACCAGTAT TGGCATTGTC
TTAAGTTCTA CTGACTATTC ATTGCCTGAT GATTTGATTC GAGATGCAGA CATTGCTATG
TATCGCGCCA AAGCAAAAGG AAAAGGCTGT TACGAAATCT TTGATAAGGT GGTTTCTAAC
CAATCATACC AGGACGTTAA CCCTTCTCCT GTGGTCGAAG ATACCTGA
|
|---|
| Protein sequence | MPVNILIVED ESIVAQDLQM TLEELGYEVC AIADSGELAI EKATTFKPDL ILMDIRLIGE
MDGIEAAGII VKNWNIPIVY LTAHGDEETV ARAKLTNPYG YLIKPFVEQD LRITLEIALY
KHQIQQTLIE YKQWLFTILQ SVGDGVLTTD IHGQITYLNP MAEHLTGWSL AEARGKPVTE
VFKLIDEVTR QPIESPITKA LEIRQIKNLP DNTVLITKDQ QEIPIGDSIA LIYEDKDIIS
LKKQKSQCMG VVVIFRDITE QKLMNQKLHR QAFYDPLTNL PNRRWFYERL IDAIERVKRN
PTYLFAVLFL DLDRFKVIND SLGHPIGDRL LTSVASRLRN VLRSIDTISR FGGDEFAILL
ENIHSSEEAI QIAQRIHKIL QVPFLIDGKE VLTNTSIGIV LSSTDYSLPD DLIRDADIAM
YRAKAKGKGC YEIFDKVVSN QSYQDVNPSP VVEDT
|
|---|
| |