More than 300 homologs were found in PanDaTox collection
for query gene Mboo_1813 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_1813  response regulator receiver protein  100 
 
 
316 aa  637    Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_009712  Mboo_1007  putative GAF sensor protein  39.55 
 
 
311 aa  192  8e-48  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164021  normal  0.860345 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  58.14 
 
 
603 aa  157  2e-37  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  47.95 
 
 
472 aa  153  2.9999999999999998e-36  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  32.62 
 
 
591 aa  147  3e-34  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  53.33 
 
 
380 aa  147  3e-34  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  54.96 
 
 
376 aa  145  7.0000000000000006e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  51.91 
 
 
701 aa  142  9.999999999999999e-33  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  49.03 
 
 
474 aa  140  1.9999999999999998e-32  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  48.98 
 
 
257 aa  138  1e-31  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  45.89 
 
 
386 aa  137  3.0000000000000003e-31  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  51.37 
 
 
455 aa  136  5e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_1725  multi-sensor signal transduction histidine kinase  43.62 
 
 
499 aa  135  7.000000000000001e-31  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  53.33 
 
 
359 aa  135  7.000000000000001e-31  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  51.54 
 
 
450 aa  135  9.999999999999999e-31  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  52.42 
 
 
143 aa  134  1.9999999999999998e-30  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  49.62 
 
 
704 aa  134  1.9999999999999998e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  54.47 
 
 
131 aa  134  1.9999999999999998e-30  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  45.03 
 
 
989 aa  134  3e-30  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  50.68 
 
 
455 aa  134  3e-30  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  45.39 
 
 
255 aa  133  3e-30  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  49.21 
 
 
636 aa  133  3e-30  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  52.71 
 
 
373 aa  134  3e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  47.22 
 
 
355 aa  134  3e-30  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  50.76 
 
 
953 aa  134  3e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  47.69 
 
 
130 aa  133  3.9999999999999996e-30  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  42.05 
 
 
258 aa  132  6.999999999999999e-30  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  48.87 
 
 
135 aa  132  9e-30  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  42.28 
 
 
384 aa  131  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  51.15 
 
 
377 aa  131  2.0000000000000002e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  46.85 
 
 
461 aa  130  3e-29  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  43.71 
 
 
989 aa  130  3e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  48.87 
 
 
352 aa  129  6e-29  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  46.15 
 
 
340 aa  129  9.000000000000001e-29  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_007413  Ava_3003  PAS/PAC sensor hybrid histidine kinase  46.48 
 
 
498 aa  127  3e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1360  putative PAS/PAC sensor protein  42.66 
 
 
429 aa  126  5e-28  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00110028  hitchhiker  0.000665614 
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  45.38 
 
 
429 aa  126  6e-28  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  49.6 
 
 
238 aa  125  6e-28  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_009712  Mboo_2407  response regulator receiver protein  52.71 
 
 
182 aa  124  2e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008554  Sfum_2639  multi-sensor hybrid histidine kinase  43.17 
 
 
817 aa  124  3e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  42.18 
 
 
336 aa  123  4e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  47.33 
 
 
667 aa  123  5e-27  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  46.77 
 
 
426 aa  122  6e-27  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  45.31 
 
 
450 aa  122  7e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_009712  Mboo_1912  response regulator receiver protein  47.58 
 
 
263 aa  121  1.9999999999999998e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.181503  normal  0.732361 
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  47.69 
 
 
701 aa  119  9e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  49.18 
 
 
352 aa  119  9e-26  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4302  signal transduction histidine kinase  45.9 
 
 
343 aa  118  9.999999999999999e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.219335  normal  0.321802 
 
 
-
 
NC_007955  Mbur_0883  response regulator receiver  46.38 
 
 
273 aa  117  1.9999999999999998e-25  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  46.51 
 
 
404 aa  117  1.9999999999999998e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_007519  Dde_3002  putative PAS/PAC sensor protein  48.55 
 
 
469 aa  116  3.9999999999999997e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.345319  n/a   
 
 
-
 
NC_007948  Bpro_3510  PAS/PAC sensor hybrid histidine kinase  48.03 
 
 
521 aa  115  6.9999999999999995e-25  Polaromonas sp. JS666  Bacteria  normal  normal  0.269968 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  46.21 
 
 
458 aa  115  1.0000000000000001e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  47.46 
 
 
245 aa  112  9e-24  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_007355  Mbar_A2510  transcriptional regulator  44.03 
 
 
157 aa  112  1.0000000000000001e-23  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000843612  normal  0.354799 
 
 
-
 
NC_011832  Mpal_0573  response regulator receiver protein  35.15 
 
 
261 aa  110  2.0000000000000002e-23  Methanosphaerula palustris E1-9c  Archaea  normal  0.666159  normal  0.332219 
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  36.26 
 
 
337 aa  110  4.0000000000000004e-23  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_007413  Ava_4326  PAS/PAC sensor hybrid histidine kinase  45.71 
 
 
571 aa  109  7.000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  43.2 
 
 
126 aa  107  3e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  41.8 
 
 
229 aa  106  6e-22  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  45.16 
 
 
194 aa  104  2e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013730  Slin_3671  Sigma 54 interacting domain protein  41.18 
 
 
657 aa  103  4e-21  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  42.86 
 
 
191 aa  103  4e-21  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_013132  Cpin_4365  two component, sigma54 specific, transcriptional regulator, Fis family  38.21 
 
 
471 aa  103  4e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.231326 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  44.78 
 
 
197 aa  103  4e-21  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  46.77 
 
 
196 aa  103  5e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  42.02 
 
 
220 aa  103  5e-21  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  42.19 
 
 
194 aa  101  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  44.54 
 
 
206 aa  101  2e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  45.16 
 
 
196 aa  100  3e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  37.98 
 
 
561 aa  100  3e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_007796  Mhun_0118  putative PAS/PAC sensor protein  42.5 
 
 
265 aa  100  3e-20  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  41.09 
 
 
210 aa  100  3e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  41.09 
 
 
210 aa  100  3e-20  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  41.09 
 
 
210 aa  100  3e-20  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  43.7 
 
 
206 aa  100  4e-20  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_014230  CA2559_08681  transcriptional regulator  36.73 
 
 
240 aa  99.4  8e-20  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.803849  n/a   
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  40.68 
 
 
199 aa  99  9e-20  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  32.64 
 
 
207 aa  99  9e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  42.02 
 
 
201 aa  99  9e-20  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  38.67 
 
 
201 aa  99  9e-20  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_013132  Cpin_0268  sigma54 specific transcriptional regulator, Fis family  39.34 
 
 
651 aa  98.6  1e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  41.41 
 
 
194 aa  98.6  1e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013730  Slin_4327  transcriptional regulator, NifA subfamily, Fis Family  34.55 
 
 
875 aa  98.2  1e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.184763 
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  42.5 
 
 
122 aa  97.8  2e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  40.48 
 
 
214 aa  97.8  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  40.91 
 
 
229 aa  97.4  2e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  42.02 
 
 
197 aa  97.4  3e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  42.5 
 
 
205 aa  97.1  4e-19  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_007796  Mhun_2576  response regulator receiver domain-containing protein  44.17 
 
 
122 aa  96.7  4e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  40.68 
 
 
204 aa  97.1  4e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_1348  two component, sigma54 specific, transcriptional regulator, Fis family  40.98 
 
 
461 aa  96.7  5e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0115  two component, sigma54 specific, transcriptional regulator, Fis family  37.78 
 
 
481 aa  96.7  5e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3669  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  34.69 
 
 
432 aa  96.3  6e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  38.33 
 
 
229 aa  95.9  8e-19  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009712  Mboo_2336  response regulator receiver protein  42.15 
 
 
355 aa  95.5  1e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.404573  normal  0.642469 
 
 
-
 
NC_009712  Mboo_2032  response regulator receiver protein  39.52 
 
 
387 aa  95.5  1e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0686114 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  38.98 
 
 
199 aa  95.1  1e-18  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_013730  Slin_3427  two component transcriptional regulator, LytTR family  42.24 
 
 
256 aa  95.1  1e-18  Spirosoma linguale DSM 74  Bacteria  normal  0.239231  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  40.15 
 
 
213 aa  95.1  1e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
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