| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3002 |
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| Symbol | |
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| ID | 3758800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 2987260 |
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| End bp | 2988669 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637783908 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_389491 |
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| Protein GI | 78358042 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.345319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCTC GTTCCATCCT GCTGGTGGAA GACGAACCAG TCGTGGCCTT TGACGTGGCG
CACCGGCTGC AGCTGCTGGG TTATCCCGCG CCGTCCACGG TCCCTTCCGG AGAAGAAGCG
CTGCGTGCCG CCGCTGCCCT GCGGCCCGAT ATCGTCCTTA TGGACATCAT GCTGGAAGGA
GAGATGGACG GCATAGAAAC GGCCGCGCTG CTGCATGACC GGTTCGACGT GCCTGTCATC
TACCTTACGG GCCTCATGGA ACCGTCACTG CTGGAGCGCG CCAAAATAAC CGGCCCGTTC
GGGTATGTTG TCAAGCCGTT TGACGACAGG GAACTGCACA TCTGCATTGA GATGGCGCTG
TACAAACACG CAGCGGAACG GGAACGCACC GAGCGCGAGC AGCTTTTTGC CGCCACGCTG
CGTTCCATAC GCGAAGCGGT CATGATCATT GACAGGCAGG GGGTGATAAC GTTCTGCAAC
CCCGCTGCGC AGGAGCTGCT GCACCTTTCG GCAGCACAGC TGGAACAGCG GATGTTTGCC
TCCGTCGCCA GCCTGATGGT GGAAGGAGAC GCAACCGCCT CAGACCCCCG CCGGCTGGTG
CTGCGCCATG CAGGTACAGG CCGCAGGTCG CTCAACGCAA TACTGCAGCA CGCATCGGGA
CACTGCCCTG TGGAAATTTC GGCCACGGTC ACCGGCGACA GCCCGGACAG GGCGGGCACC
GTGCTGGTGC TGCGCGACAT GACAACCCGC CGCCGCGACA AAGCATCGCT GACAAAGGCT
CTGGACGAAC TGCAGCGGGT GTTTGAACAG ACGGTCATGG CCCTTGCCGT GACCTCGGAA
AAAAGAGACC CTTACACCGC AGGACACCAG CAGCGCGTGG CACGTCTGGC CTGCGCCATT
GCGGCCCGCA CCGGCATGGA TGTACACCGC TGTCAGGGCA TACGCATGGC CGGCCTGCTG
CACGACATCG GCAAAATTTA TGTTCCCTCG GAAATTCTGA CAAAGCCCGC CACACTTTCC
GCCATTGAAC AGAACATCAT GCGCACCCAT CCGCGGGTGG GCTTCGACAT CCTCAAGGGC
GTTGATTTTC CGTGGCCGGT GGCACAGACA GTATTGCAGC ACCACGAACG GCTGGACGGC
AGCGGCTATC CGCTGGGGCT CTGCAAAGAT GACATACTGC CCGAATCACG GGTTCTGGCC
GTGGCCGACG TGGTGGAGGC CATGTTCTCA CACCGGCCGT ACCGCCCGTC GCTGGGGCTG
ACACACGCGC TGGACGAAAT ACGCACCGGA GCCGGTACCC TGTACTGTGC TGACGCCGTG
CGTGCCTGCC TGGAACTTTT TGACGAGGGC TTTGCCTTTG ACACTCCCGC GGAGCATCCC
GCGGACAATG ACGGAGACCT GACACCATGA
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| Protein sequence | MTPRSILLVE DEPVVAFDVA HRLQLLGYPA PSTVPSGEEA LRAAAALRPD IVLMDIMLEG
EMDGIETAAL LHDRFDVPVI YLTGLMEPSL LERAKITGPF GYVVKPFDDR ELHICIEMAL
YKHAAERERT EREQLFAATL RSIREAVMII DRQGVITFCN PAAQELLHLS AAQLEQRMFA
SVASLMVEGD ATASDPRRLV LRHAGTGRRS LNAILQHASG HCPVEISATV TGDSPDRAGT
VLVLRDMTTR RRDKASLTKA LDELQRVFEQ TVMALAVTSE KRDPYTAGHQ QRVARLACAI
AARTGMDVHR CQGIRMAGLL HDIGKIYVPS EILTKPATLS AIEQNIMRTH PRVGFDILKG
VDFPWPVAQT VLQHHERLDG SGYPLGLCKD DILPESRVLA VADVVEAMFS HRPYRPSLGL
THALDEIRTG AGTLYCADAV RACLELFDEG FAFDTPAEHP ADNDGDLTP
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