| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1773 |
|---|
| Symbol | |
|---|
| ID | 7270319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1851155 |
|---|
| End bp | 1852315 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643570389 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002466803 |
|---|
| Protein GI | 219852371 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTG AGTCGGTACT GATTGTGGAA GATGAGGCGA TTGTCGCCCT GTCTATTGAA
AAAAGGTTGA AGAGCCTTCA TTTTAATGTC ACCGGGATAG TGGCTACTGG AGATGATGCA
ATCGCTGCGG TTGAGAAACG GGTACCAGAT CTCATCTTGA TGGATGTTCA CCTGCAGGGT
AGGATGGATG GTATCCAGGC AGCACAGATC ATCCATGAGC GGTATGACCT TCCGGTGATC
TATCTGACTG CCTATGCAGA TGATGATACG ATTGCACGGG CTGTGGAGAC CGGAGCGTAT
GGTTACCTGA TCAAGCCGTT CGGCGAACGG GATCTTCATT CCTCGATCCA GCTGGTTCTC
TCCAGGCACA GGGTGGAGCA GCGGTTGAAG TCCCAACAGG CACAACTCGC GGCAACAAAC
AGGGAACTGG AGGCGTTCAG TTACTCGGTC TCTCATGATC TCAGGGCGCC GCTCAGGACC
ATCGACGGCT ACACTTCGAT CCTCCTCGAC CTCTGTGATG AAAAACTCGG GGAGGATGAA
AAGGGGTATC TGTCCCGGAT CCAGGCAGCT GCAAAGAAGA TGGATGACCT GATCATCGAA
CTTCTCTTCC TTTCCCGGCT GAGCAGGACT ACCCTCCATT ATGAATCCAT CGATGTGAGC
AGGATGGCAT CCGAGATCCT TGAAGAGCTG ACGCATACCC ATCCGGGACG GAAGGTCCGG
GTGCGGGTCG AACCGGGGAT CATGGCCACG GCGGATCGTT CACTGCTCCA GAGTGTCTGC
TGGAATCTGA TCGAGAACGC ATGGAAATAT ACTGGAAAGA CTGTCGATGC GGAGATCGAG
ATCTTCAGTG AGGAGCAGGG TGGCGAGCAG GTCATTGGTG TCAGGGATAA TGGGGCCGGC
TTTGATATGG AGCAAGCCGA ACACCTGTTC GCTCCATTCC ATCGGCTCCA TCCGATCTCT
GAGTTCCCCG GAACCGGGAT CGGCCTCGCC ACGGTACAAC GGATCGTTCA TCGTCATGGC
GGGGTGATCT GGGCGGAGGG CCAGCCTCTT GGAGGCGCAG TCTTCAGGTT CACCCTTCCG
GTGAAACAGT CAGTCCCCCC TGTTGAGGAT GAACAGAAAT CATCCGTGAA TTCCCCGGAT
ATGAACAAAA TTTTAAGGTG A
|
|---|
| Protein sequence | MTFESVLIVE DEAIVALSIE KRLKSLHFNV TGIVATGDDA IAAVEKRVPD LILMDVHLQG
RMDGIQAAQI IHERYDLPVI YLTAYADDDT IARAVETGAY GYLIKPFGER DLHSSIQLVL
SRHRVEQRLK SQQAQLAATN RELEAFSYSV SHDLRAPLRT IDGYTSILLD LCDEKLGEDE
KGYLSRIQAA AKKMDDLIIE LLFLSRLSRT TLHYESIDVS RMASEILEEL THTHPGRKVR
VRVEPGIMAT ADRSLLQSVC WNLIENAWKY TGKTVDAEIE IFSEEQGGEQ VIGVRDNGAG
FDMEQAEHLF APFHRLHPIS EFPGTGIGLA TVQRIVHRHG GVIWAEGQPL GGAVFRFTLP
VKQSVPPVED EQKSSVNSPD MNKILR
|
|---|
| |