| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1528 |
|---|
| Symbol | |
|---|
| ID | 5411931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1600023 |
|---|
| End bp | 1601375 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640868763 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001404689 |
|---|
| Protein GI | 154151071 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00374994 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.77554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAGA TTCTTGTGGT CGACGATGAA GCAATCATTA CCATGCAGCT CGAAGAGAGG
CTGCATGCAA TGGGGTACAC GGTTGCCGGC ATGGCAGCAT CGGGAGAGGA TGCGATCGGG
AAGGCACGCA GGCTCTCACC CGATCTTATT CTGATGGACA TCGTTATGCC GGGAAAACTC
AACGGCATCG AGGCAGCGGA GGTCATTTGT TCAGAACTGG ACATCCCGGT GATTTTTGTT
ACCTCGTACG CCGATGACGC GATTATTGAG AAGGCAAAAA AGGCCCGGCC GTACGGCTAT
ATCGTAAAAC CCTTCAGTGA ACTGGAAATA AAAGCAGCCA TTGAAGTGGC CCTCTTCCGC
AAGGCAGCGG AACGGGAATC AAAACAAAAC GCAGAGGCCG CCAGGGCCGC GACCCCGCTG
CAGCCTGCGA CTCTTCCGGG TACTGCCCCC GGGGCGGTAC AGGAAGCGGA GTACCTTGCC
CTGCCCGAGA TAAAAACGGT GCTGTTAAAG GATATCTTCT CCGGCATTGT CCTTTTCCTC
TATGTGGATC CCCAGGTAAA GGATCCGATA TTCAAATTCG CCATTGAGGC AGGGATCCAA
AAAGGGGGGC GGACTTTCTT TGCCTACCAC CAGTCCGTGC TGCAGAAATA TTTCCTTGAA
GAGGGCCGGA GCGGCCGGCT CTTTAGCCGG CGTATAAAAC CAGGGGAACT CTTTTTGCTG
CACAGTCTTA TCGAAAAATG CACCCAGACC CTTCCCCCGG CAGGTTCCGG GGGCAGTCTC
CAGGTACTTT TCGACTTTTC CGACACCGGG GAGTTCGACG ATATCGTAGC GGTAAAAAAC
ATGATCCTGA AATACAGGGA GACCGGTGTC CCCATCACCG GCATTATTGC CGCCAGCATG
GCTGGTCTTG ATCACGAACG GATCCGGCTG CTCTCGGAAG GCATTGCAAA GATCATCGTG
TCGACCGGGA AGGACACGAT GATTTCCTTT GCCCATTCAA CGTTCCCGCC CGAGTCCATC
ACTGTTGTCC CCCAGGCCAC AATCGAGGAC GTGGTAAAGA AACTGCTTGA ACCGGTCATA
CTCTCCATTC TCGAAAAACC GATCTCCGGG TTTGATATTG TCCATGAGAT CCATAACCGG
TACAAGGTTC TCATCCCCCA GGCGCGGATT TATACGTACC TCTACGAACT CCAGAAGAAC
GGGTACCTGG AGATGAAGGT ATCCGGCAAA TCAAAGTTGT ACTATCCTAC TGAGAGCGGG
AAAAAATACA TCCGGCAGCG CCTGATCGAG TTCAAATTTG TCTTCCGGCA CATCATGGGC
GAAGAGCCGG CTCTCCCGGT AAAAAAGGAA TGA
|
|---|
| Protein sequence | MPKILVVDDE AIITMQLEER LHAMGYTVAG MAASGEDAIG KARRLSPDLI LMDIVMPGKL
NGIEAAEVIC SELDIPVIFV TSYADDAIIE KAKKARPYGY IVKPFSELEI KAAIEVALFR
KAAERESKQN AEAARAATPL QPATLPGTAP GAVQEAEYLA LPEIKTVLLK DIFSGIVLFL
YVDPQVKDPI FKFAIEAGIQ KGGRTFFAYH QSVLQKYFLE EGRSGRLFSR RIKPGELFLL
HSLIEKCTQT LPPAGSGGSL QVLFDFSDTG EFDDIVAVKN MILKYRETGV PITGIIAASM
AGLDHERIRL LSEGIAKIIV STGKDTMISF AHSTFPPESI TVVPQATIED VVKKLLEPVI
LSILEKPISG FDIVHEIHNR YKVLIPQARI YTYLYELQKN GYLEMKVSGK SKLYYPTESG
KKYIRQRLIE FKFVFRHIMG EEPALPVKKE
|
|---|
| |