| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0900 |
|---|
| Symbol | |
|---|
| ID | 5410396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 884387 |
|---|
| End bp | 884767 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640868126 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001404061 |
|---|
| Protein GI | 154150443 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000110071 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGG GAACGATACT TCTGGTAGAG GACGATGATA TTATCGCAAA GGTCGTTGGC
TGGCGTCTGG AAAAACTAGG GTACAGCCTC TGCGGACGCG CCTCTTCCGG TACCGAAGCC
CTGGACCTGC TTGAGCGGAA CGTTCCTGAC CTCATCCTCA TGGATATCAA CATCAAGGGA
GAGATCAACG GGATCGAGAC CACAAAGATG ATCAAGAAAA GGATTCACAT CCCCGTTATT
TACCTCACAT CCCATTCGGA TGACGTTACC CTTGCCCGGG CCAAGGAGAC CTACCCGGAA
GGATTTATCT CAAAGCCCTT CAATGACAAT GACCTGAAAG TGGCAATCGA ACTGGCTCTC
AACAGCAGCA CGCTCAGATA A
|
|---|
| Protein sequence | MSKGTILLVE DDDIIAKVVG WRLEKLGYSL CGRASSGTEA LDLLERNVPD LILMDINIKG
EINGIETTKM IKKRIHIPVI YLTSHSDDVT LARAKETYPE GFISKPFNDN DLKVAIELAL
NSSTLR
|
|---|
| |