| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_2709 |
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| Symbol | |
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| ID | 3725414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3162395 |
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| End bp | 3163684 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637752319 |
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| Product | two component signal transduction response regulator |
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| Protein accession | YP_358115 |
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| Protein GI | 77920300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 94 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGCGA AGCTGTTAAT CGTTGAAGAC GAAGCGTTTA TTGCGCTGGA GATCCAGACG
CGCCTCCAGA GGATGGGCTA CGAGGTGTGC GGCGTTGTTT CGCACGGCGA GGATGCCGTA
CGCCAGGCGG TTGACCTGCG GCCGGATCTG GTCTTGATGG ATATCAGCCT CAAGGGGCAG
ATGAGCGGAG TCGAAGCCGC TGCCGCGATC CGCCGGACAT GCCGGATACC CGTTGTCTAT
CTTACGTCCC ATGCCGATGG GGATACTCTG GAACGGGCCA AAAGCACCGA TCCGTACGGT
TATCTGCTCA AGCCCTTTCA GGAAAAAGAT CTGCGCATCG GCATCGAGCT GGCCTTGCAC
AAACATGCCT TGCAGCGTCA GGCCGAGGAG AGCGAAGAGA AGTTCCGGTT GGTGACCGAG
AGCATCGACG ATGTCTTCTG GCTCAGTACG GCCGATTTAA AAGAGCTGAT TTATGTCAGC
CCCGCCTATG AAAAGATCTG GGGGCGCAGA CGGGAGGAGT TGCATGATGC TCCCCTGTCG
TTCCTGGAAG GTGTCCATCC GGAAGACCGC AGCGCGGTCC GTTCATTGCT GGATCATCCC
CCCCTTGAAA GCCTGCAACT GGAATACCGC ATTGTCCGAC CTGACGGTTC CATCTCCTGG
GTGCGGGATC GCCGATTCCC CGTCTCCGAT CCGCAGGGAC GCCCCTACCG TCTGGCCGGC
GTGGTGACCG ATATCACCGA ACAGAAAGAC GCGCAACTGC AACTTTTGAT TCTTAACCGG
AAGCTGCAGC AGCAGGCGAC CCATGATTCT CTGACCGGAT TGCCCAACCG TCGTCTGCTT
ATCGACCGCC TCGAACAGGC CCTGGCGCGG GCCCGGCGCA ACAACGGACG TCTTGCCATG
CTGTTTATCG ATCTCGACGG CTTCAAAGCG GTCAACGATC GCCTGGGGCA TACGGCCGGC
GACGAGGTGC TGGAAATCAT CGGCCGGCGG CTCAGCCACC TGTTGCGTTC GGCCGATACC
GCGGCGCGTC TGGGGGGCGA TGAATTCGGC CTTGTGTTGT CGAAAATCAA AGACAAACAA
GACGCCAGTC TGGTGGCGCA GAAGGTTCTG GAAGCCATAG CCTCGCCCTT TATCATTCGG
GACGAACGTT GCTATATCGG TGCTTCTATC GGTATCAGCC TCTATCCGGA GCATGGTCTT
TCCGCGGATG ACCTTATCAG CCGGGCCGAT ACCGCCATGT ACAAGGTCAA ACATTCCGGC
AAAGGCACCT TCGCTTTTTA CCTCGAGTAG
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| Protein sequence | MKAKLLIVED EAFIALEIQT RLQRMGYEVC GVVSHGEDAV RQAVDLRPDL VLMDISLKGQ
MSGVEAAAAI RRTCRIPVVY LTSHADGDTL ERAKSTDPYG YLLKPFQEKD LRIGIELALH
KHALQRQAEE SEEKFRLVTE SIDDVFWLST ADLKELIYVS PAYEKIWGRR REELHDAPLS
FLEGVHPEDR SAVRSLLDHP PLESLQLEYR IVRPDGSISW VRDRRFPVSD PQGRPYRLAG
VVTDITEQKD AQLQLLILNR KLQQQATHDS LTGLPNRRLL IDRLEQALAR ARRNNGRLAM
LFIDLDGFKA VNDRLGHTAG DEVLEIIGRR LSHLLRSADT AARLGGDEFG LVLSKIKDKQ
DASLVAQKVL EAIASPFIIR DERCYIGASI GISLYPEHGL SADDLISRAD TAMYKVKHSG
KGTFAFYLE
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