| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4327 |
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| Symbol | |
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| ID | 8728087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5246486 |
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| End bp | 5249113 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003389108 |
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| Protein GI | 284039178 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.184763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGACC TCCAATATAT TGGAGACACA AAATGGAGTT CGTATTACCT TGTACCTTTG
CCGTTCATCA ACTCAACGAA TCGAATGGTA CTGCCCAGCG AGTTTATCCC GTTACCCAAA
TTACTCATTG TCGAGGATGA GTTTTTGATT GCGAATGACC TCAGCCGGAT GCTGCAAAAG
GCAGGTTATC AGGTTGTTGG TACGGCTGCA TCAGTAGCGG AAGCAAAAGC CATGGTGACG
CAGCAAACAC CCGACATTGT TTTGCTGGAC ATTTTTCTGA ACGACGACCA AACCGGGATT
GATCTGGCCA ACTGGCTCAA TGAGCAAACA GTGCCTGTTC CGTTTGTCTT TCTGTCGGCT
AACCTTACCG ATAGCATTCT GGAAGTGGCT AAAGTAACCC AGTCGTTTGG CTTTCTGAAC
AAGCCCTTTC GGGAGAAAGA CGTGCTGACA ACGCTGGAAA TCGCCCGCTA CCGTCATGCA
CACAGCGAAG AGGCCCGACT AAGGCAGCAG CAGGCTGTAC AGATAGCCGT CAACAATGCC
ATTGTTACTA TTCAGGACCG CGACCAGCTT TGTCGGGCTA TTGCCGATCA GATAAATAAG
CTAGTACCCT TTTCCTTTCT GAACCTGCGG ATCGGCTTGC CCGACGAAGT ATCGTTTTAC
TGGCTGATGC TGGCGAAAAC CGACGTAAAT ACATTTGAGC GGGTAAACCT GGCCATGTTG
CTTCGGGGCG AAGTAGAAGA AGGATTGATT CAGAAACTGG ACCGCGAAGC GCCGGATCGG
TTGGGGGAGG AGCAGGGCGT TTTCACGGGC GACGCCTTCG ATCAACTGTG TGAACGGTAT
ATAACCGCCC GCTCCTGCCG GGATAATTTC GGGGTTCGTT CGCTGGTGCT CTTCCCGATC
CAACTGAAGC GGAAGGCCTT CACAACCATC ATTCTGTCCA GCATCCGGGC CGATGGGTTT
ACGCAGAAGG ATTACCAGGC CGTTAACCTG ATAGCCCCGC AAATTGCCCT GGCGCTGGAT
AATTTACTGG CCTACGAAGA GATTGAAGCA CGCCGACAAA CCAAAACGAC GGAGCTGGCC
ATTGTCAATG CGTTTCAGAA CGGCAAAGAC AGCCACGCGA TTATTCCGCA GGTGGCGGCT
ATTATCAATG AGTTGATGCC GTTCGACCTG CTGGCTGTTT ACCGGATTGG GCGCCTGCTG
GAATCCGCTG CCATCGATAT GGCCGTGCAA AAACAGGGTG GTGTTTTTGT GGCCATCACA
GAAAAGGACG TTGTTCCCCA AACCCTTGCT GATCAGGCCA GCTGGAAACA GGCCCTGGCC
GATATGGAAA CCTGGCTTGT TGAACCCGCC ATTAACGTAG GCCAGCAATT TGTCGATATA
CAGCAGCGCA GTGTGGTGAG CCGGTTTTAT GCCGAAGCAC TGGGCTTGAA GTCGTCGATG
TATGTGCCGA TCTTTAGCAA AGGGAAGCCA ATAGCCGCCT TGATTCTGGC CAGTAAAGCC
GCGTATGCCT TTACGCCTAA AGACTTGTGT ACGCTACAGG ACATTAGCGT CGAACTCGCC
CTGGCACTGG AAAACCTATC GGCCTACGAA CGCATAAAGG TGCTGAGTGA ACACCTGGAG
CAGGAAAAAA CGTATCTGGC CGAAGAAATC AAAACCAGCC ATAATTTTGA AGAGATCATT
GGCACGAGTT CGTCCATGCA AACCGTGTTT AACGCCATCG GGCAGGTAGC CCCTACGGAT
TATACCGTCC TGATTATGGG CGAAACCGGA ACGGGTAAGG AACTCATTGC CCGGGCGGTG
CATAGCCTGT CGGCTCGTCG TGACCGGCCC GTCGTGAAAA TAAACTGTGC GGCTTTACCC
GCCCAACTCA TCGAGTCTGA ACTGTTTGGT CATGAGCGGG GTAGCTTTAC GGGTGCTACC
GAAAAGCGAA TCGGTAAGTT TGAGCTGGCA AACGGGGGAA CGCTCTTTCT GGACGAGATC
GGCGAACTGC CTCTTGAATT ACAGGCCAAG CTCCTGCGAG CTATTCAGGA GAAGGAGATT
GAACGGGTGG GTGGTAAAGG CGTTATCCTG ATCAATACCC GCATCATTGC GGCCACCAAC
CGAAACCTTC AGCAGGAAGT TGCCGCCGGG CGGTTCCGGT CCGATTTATA TTACCGGCTC
AACGTGTTCC CCATTGTGGT GCCGCCCCTG CGCGAGCGGC AGGAAGATAT TTTGCCGCTC
ACGATGCATT TTTTGCAGAA GATCAGTAAA AAGCTCGGCA AGCCCATCAC CAATATCGCC
AACGCATCGC TTCAGCAACT CCTCCAGTAT CCCTGGCCGG GCAATATCCG GGAGTTGGAG
CACGTGCTCG AACGGTCGTC TATTCTCTCG CAAAGCGCCA CCCTGACGCT GGCTGAGCCT
TTGCGGGCGG CCACTACTGC TTTTCCGCCG TTTGTGGTGC AGTCTTCCGA AGAGGTAAAA
TCCATTGACG ATGCCATGCG GCTGGCTATA CTGGCGGCTC TGGCAAAATC GGGGAATCGT
ATTCGGGGAA CTGGCGGAGC TGCCGAACTG CTTAATATCA AGCCTACCAC CCTGGAGGCC
CGGATGAAGA AATTGAACAT CAGTGCCTAT CAGCAGCCGG GTTCCTGA
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| Protein sequence | MLDLQYIGDT KWSSYYLVPL PFINSTNRMV LPSEFIPLPK LLIVEDEFLI ANDLSRMLQK
AGYQVVGTAA SVAEAKAMVT QQTPDIVLLD IFLNDDQTGI DLANWLNEQT VPVPFVFLSA
NLTDSILEVA KVTQSFGFLN KPFREKDVLT TLEIARYRHA HSEEARLRQQ QAVQIAVNNA
IVTIQDRDQL CRAIADQINK LVPFSFLNLR IGLPDEVSFY WLMLAKTDVN TFERVNLAML
LRGEVEEGLI QKLDREAPDR LGEEQGVFTG DAFDQLCERY ITARSCRDNF GVRSLVLFPI
QLKRKAFTTI ILSSIRADGF TQKDYQAVNL IAPQIALALD NLLAYEEIEA RRQTKTTELA
IVNAFQNGKD SHAIIPQVAA IINELMPFDL LAVYRIGRLL ESAAIDMAVQ KQGGVFVAIT
EKDVVPQTLA DQASWKQALA DMETWLVEPA INVGQQFVDI QQRSVVSRFY AEALGLKSSM
YVPIFSKGKP IAALILASKA AYAFTPKDLC TLQDISVELA LALENLSAYE RIKVLSEHLE
QEKTYLAEEI KTSHNFEEII GTSSSMQTVF NAIGQVAPTD YTVLIMGETG TGKELIARAV
HSLSARRDRP VVKINCAALP AQLIESELFG HERGSFTGAT EKRIGKFELA NGGTLFLDEI
GELPLELQAK LLRAIQEKEI ERVGGKGVIL INTRIIAATN RNLQQEVAAG RFRSDLYYRL
NVFPIVVPPL RERQEDILPL TMHFLQKISK KLGKPITNIA NASLQQLLQY PWPGNIRELE
HVLERSSILS QSATLTLAEP LRAATTAFPP FVVQSSEEVK SIDDAMRLAI LAALAKSGNR
IRGTGGAAEL LNIKPTTLEA RMKKLNISAY QQPGS
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