More than 300 homologs were found in PanDaTox collection
for query gene Jden_1223 on replicon NC_013174
Organism: Jonesia denitrificans DSM 20603



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  100 
 
 
229 aa  453  1.0000000000000001e-126  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  92.02 
 
 
226 aa  347  1e-94  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  90.48 
 
 
227 aa  342  2.9999999999999997e-93  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  87.7 
 
 
220 aa  332  4e-90  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  84.21 
 
 
220 aa  323  9e-88  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  73.21 
 
 
215 aa  308  5.9999999999999995e-83  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  72.2 
 
 
229 aa  289  2e-77  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  69.59 
 
 
201 aa  285  5.999999999999999e-76  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  70.37 
 
 
201 aa  283  2.0000000000000002e-75  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  70.05 
 
 
207 aa  273  1.0000000000000001e-72  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  67.37 
 
 
204 aa  274  1.0000000000000001e-72  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  68.09 
 
 
212 aa  268  5e-71  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  71.58 
 
 
214 aa  266  2e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  67.03 
 
 
199 aa  256  1e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  63.44 
 
 
206 aa  256  2e-67  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  63.98 
 
 
206 aa  256  2e-67  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  65.05 
 
 
197 aa  255  4e-67  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  69.89 
 
 
198 aa  255  4e-67  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  65.78 
 
 
200 aa  253  2.0000000000000002e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  64.17 
 
 
205 aa  252  3e-66  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  72.13 
 
 
207 aa  251  5.000000000000001e-66  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  65.22 
 
 
213 aa  251  8.000000000000001e-66  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  63.49 
 
 
199 aa  251  1e-65  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  63.24 
 
 
210 aa  247  1e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  63.44 
 
 
229 aa  247  1e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  63.04 
 
 
194 aa  246  2e-64  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  61.9 
 
 
199 aa  246  3e-64  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  61.83 
 
 
210 aa  245  3e-64  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  61.83 
 
 
210 aa  245  3e-64  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  61.83 
 
 
210 aa  245  4e-64  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  59.46 
 
 
207 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  62.9 
 
 
189 aa  240  1e-62  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  64.48 
 
 
205 aa  238  4e-62  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  56.16 
 
 
206 aa  236  3e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  63.33 
 
 
247 aa  235  4e-61  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  59.89 
 
 
200 aa  227  1e-58  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  53.85 
 
 
197 aa  216  2.9999999999999998e-55  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  56.76 
 
 
195 aa  215  5e-55  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  54.59 
 
 
191 aa  215  5.9999999999999996e-55  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  54.95 
 
 
194 aa  213  2.9999999999999995e-54  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  54.95 
 
 
194 aa  209  3e-53  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  46.69 
 
 
261 aa  196  2.0000000000000003e-49  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  47.47 
 
 
249 aa  193  2e-48  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2822  response regulator  43.72 
 
 
191 aa  171  1e-41  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  46.32 
 
 
203 aa  168  7e-41  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  44.81 
 
 
194 aa  167  2e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  43.55 
 
 
194 aa  166  2.9999999999999998e-40  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  39.89 
 
 
196 aa  164  1.0000000000000001e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  42.62 
 
 
188 aa  164  1.0000000000000001e-39  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  42.08 
 
 
202 aa  163  3e-39  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  39.89 
 
 
196 aa  163  3e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  45.6 
 
 
221 aa  162  5.0000000000000005e-39  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  43.96 
 
 
194 aa  161  6e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  41.3 
 
 
192 aa  158  5e-38  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
205 aa  155  5.0000000000000005e-37  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  45.74 
 
 
218 aa  150  1e-35  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  38.25 
 
 
198 aa  147  1.0000000000000001e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  38.92 
 
 
191 aa  147  1.0000000000000001e-34  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  39.01 
 
 
194 aa  147  1.0000000000000001e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
220 aa  146  2.0000000000000003e-34  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  40.44 
 
 
187 aa  144  1e-33  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  39.04 
 
 
242 aa  142  4e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  39.01 
 
 
192 aa  139  3.9999999999999997e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  34.43 
 
 
195 aa  137  1e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  38.6 
 
 
208 aa  134  1.9999999999999998e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  37.3 
 
 
198 aa  132  5e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  38.92 
 
 
243 aa  125  6e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  38.1 
 
 
198 aa  120  1.9999999999999998e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  33.51 
 
 
191 aa  118  7e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  32.62 
 
 
190 aa  116  1.9999999999999998e-25  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  42.11 
 
 
159 aa  112  4.0000000000000004e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  32.62 
 
 
191 aa  108  1e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  34.97 
 
 
191 aa  105  6e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  38.89 
 
 
636 aa  105  7e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  40.98 
 
 
704 aa  104  1e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.8 
 
 
191 aa  102  4e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  31.89 
 
 
207 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011899  Hore_07590  response regulator receiver protein  45.13 
 
 
122 aa  97.8  1e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000535524  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  32.04 
 
 
195 aa  97.4  2e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  38.1 
 
 
461 aa  96.3  3e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013522  Taci_1321  response regulator receiver protein  43.59 
 
 
120 aa  96.3  3e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  31.49 
 
 
196 aa  96.7  3e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  38.33 
 
 
316 aa  95.9  5e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  30.53 
 
 
196 aa  95.9  5e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  29.52 
 
 
195 aa  95.5  6e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  31.93 
 
 
194 aa  95.5  6e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  42.02 
 
 
123 aa  95.5  7e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  29.67 
 
 
194 aa  94.4  1e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_010424  Daud_1738  response regulator receiver protein  41.18 
 
 
122 aa  93.6  2e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2382  response regulator receiver protein  41.18 
 
 
122 aa  94  2e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  36.89 
 
 
352 aa  92.8  3e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  35.57 
 
 
359 aa  93.2  3e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  29.17 
 
 
212 aa  93.2  3e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  34.56 
 
 
603 aa  92.8  4e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.83 
 
 
219 aa  92.8  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  29.17 
 
 
224 aa  92.4  5e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  33.73 
 
 
206 aa  91.7  8e-18  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  33.73 
 
 
206 aa  91.7  8e-18  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  38.58 
 
 
355 aa  91.3  1e-17  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.7 
 
 
701 aa  91.3  1e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>