Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2639 |
Symbol | |
ID | 4459043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 3262522 |
End bp | 3264975 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639703410 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_846752 |
Protein GI | 116750065 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGG CTAAGGTAAT GATCGTCGAG GATGATGCCA TTGTGGCGTC TCATTTGGAA CGGATCCTGG TGCAGTCGGG CTACTCGGTG GTGGGAATGG TCGCAACCGG TGAAGACGCC GTGGAAAGGG CCCCCGTGCT CAGCCCCGCC ATCGTGCTCA TGGACATCCG GCTGATGGGC GATATGAACG GCATCGAAGC CGCGGACAAG ATACGCTCCA GGCTCGACAT CCCCGTTATC TACCTGACCG CCTACACCGA CCATGAGCTC CTGCGGCAGG CCAGGGCCAC GCAGCCATAC GCCTACCTTA CCAAGCCGGT GCGGGACCGT GAGTTGTGCG CCGGCCTGGA AATGGCGCTC TACAAACATG AAACCGACCG GAAAATACGG CACATCAACC AGGTCCTGCG GGCGATCCGG GACGTGGATC AACTCATCAC ACGGGAGCGC AACCGAGAAC GGCTTTTGGA AGAAGCATGC CAAATCCTGG TCCGAACGCG AGGTTACGTC ATGGTCTGGA TCGGACGGAC CGGGGAAGAC GGGTTGAGTC TGGTTCCGGT GGCCCATGCC GGACAGGGAG CCGGCACTCT TGAGCAGGTC ACGATGGGCT GGAGCCCCGA GGGTGCCCCG GAAAAGGCGA AGGCACACCC ACCCGGCACC TGCCCGACGC TGGTGTGCCA GGACGTCGCC CGGGATCCGG CCTGCGGCGC CTACCGCGCC GACGCCCTGC GCCGCGGCTA CGCTTCGTTT GCCATGGTGC CCATGATCAA CAGCGATCGA CTCTATGGAA TGCTCAACGT CTACGCCAAC TGCCCCGGCG CTTTTTCGGA CGAAGAGCTG GATCTCCTGC GCGAAGTGGC AGGGGACCTC GCCCTGGGGA TGCGGAGCAT CGAGGAAGAA GAGGAACGCA AGCGCGCCGA AGACGCCCTG CGCGAAAGCG AAGCCCGCTT CCGCCTGCTC GCCGAGAACT CCACGGACAT TATCTCCCGC CGTTTGCCGG ACGGGCGCAC CCTTTACGTG TCTCCAGCCT GCCGCTCCGT GATGGGTTAC GAACCGGCGG AGCTGCAGGA ACTCTCCGCG TTCGATTTCG TTCATCCCGA GGATCTGGAC CGGGTCTTGC GGGAATTTCA GGCCGCCGCT TCCAGCCTTC GGCCCTTCCA CGTCGAGTAT CGAGTCCGGC GCAAGGACGG AGCGTACACA TGGCTTGAGG CCAGGGGCCG CCCGATCGTC GACCAAACCA CAGGCGCCGT GGTCGAATTC CATTCGTCCT CGCGCGACGT CTCGCAACGC AAACAGGAGG AGCAGGAGCG GGCGGCCCTT GAAGAACGGC TGCGACAATC CCAGAAGATG GAGGCCATCG GCACGCTGGC GGGCGGAATC GCCCATGACT TCAACAACCT CCTCATGGGC ATCCAGGGTT ACACCTCCAT CATGCTCTTT GAAATGGACC GCAACCATCC CTACCACGAC AAGCTCAAAG CCATAGAGAG CCAGGTCCGA AGCGGCGCGG AGCTCACCCG CCAACTCCTC GGCTTCGCTT ACAGCGGGAA ATATGAAACC AAGCCCATCA ACGCGAACGA TCTCCTCGAA ACGACCGCCA CCATCTTCGG TCGGGCCAAG CAGGAAATCA CGATCCTCAT GGATCTCGAT GCGGATCTTC GTGCGGTGGA GGTGGACCGG GGGCAGATCG AACAGGTGCT GCTCAATCTC TATGTGAACG CCTGGCACGC CATGCCCGGC GGAGGGGAGC TGCGCGCGGC ATCCCGGAAC GTGGAGCTCG ATGAAGACAC GGCGGCTCTT CACGCCGTGG AACGGGGCGA GTACGTGGAA ATCGAGGTGA CCGACACCGG GATCGGGATG GATCCTAAAA CCAGGGAAAG GGTTTTCGAA CCCTTCTTCA CTACGAAGGA AATGGGCAGG GGAACCGGTC TCGGTCTCGC CTCCGCATAT GCCATCATCA AGAACCACGG CGGTTTCATG GAAGTGCACA GCGAACCGGG CATCGGAACG ACGTTCAAGA TCTTTCTCCC CGCTTCGTCC AAGCCCCCCG TGGGCACGAC ACAACCCGCG CAGGCCCCCC TGAAAGGCTC GGAGACCATC CTCCTCGTCG ACGACCAGGA TATCGTCCTG GAGCCCACCA AGTGCATGCT CGAGACGCTC GGCTACACGG TTTTCACCGC CATGAGCGGA GAGGAGGCGC TCGACATCTT CCGGGAATCC GCCCGCTGCA TCGACCTGGT GATTCTTGAC ATGATCATGC CGGAATTGAG CGGAAGCGAC ACCTATGACG AGCTGCGCGC GATGTCGCCC GGCGTGAAGG TGGTCCTTTC AAGCGGGTAC AGCCTGAACG GGCAGGCGGA GACAATACTG GCGCGCGGCT GCAACGGGTT TATTCAGAAG CCGTTCAACG TGACGGAATT GTCCCGCAAG CTCAGAGAAA TCCTCGACGG CTGA
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Protein sequence | MDAAKVMIVE DDAIVASHLE RILVQSGYSV VGMVATGEDA VERAPVLSPA IVLMDIRLMG DMNGIEAADK IRSRLDIPVI YLTAYTDHEL LRQARATQPY AYLTKPVRDR ELCAGLEMAL YKHETDRKIR HINQVLRAIR DVDQLITRER NRERLLEEAC QILVRTRGYV MVWIGRTGED GLSLVPVAHA GQGAGTLEQV TMGWSPEGAP EKAKAHPPGT CPTLVCQDVA RDPACGAYRA DALRRGYASF AMVPMINSDR LYGMLNVYAN CPGAFSDEEL DLLREVAGDL ALGMRSIEEE EERKRAEDAL RESEARFRLL AENSTDIISR RLPDGRTLYV SPACRSVMGY EPAELQELSA FDFVHPEDLD RVLREFQAAA SSLRPFHVEY RVRRKDGAYT WLEARGRPIV DQTTGAVVEF HSSSRDVSQR KQEEQERAAL EERLRQSQKM EAIGTLAGGI AHDFNNLLMG IQGYTSIMLF EMDRNHPYHD KLKAIESQVR SGAELTRQLL GFAYSGKYET KPINANDLLE TTATIFGRAK QEITILMDLD ADLRAVEVDR GQIEQVLLNL YVNAWHAMPG GGELRAASRN VELDEDTAAL HAVERGEYVE IEVTDTGIGM DPKTRERVFE PFFTTKEMGR GTGLGLASAY AIIKNHGGFM EVHSEPGIGT TFKIFLPASS KPPVGTTQPA QAPLKGSETI LLVDDQDIVL EPTKCMLETL GYTVFTAMSG EEALDIFRES ARCIDLVILD MIMPELSGSD TYDELRAMSP GVKVVLSSGY SLNGQAETIL ARGCNGFIQK PFNVTELSRK LREILDG
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