Gene Sfum_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2639 
Symbol 
ID4459043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3262522 
End bp3264975 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content62% 
IMG OID639703410 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_846752 
Protein GI116750065 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGG CTAAGGTAAT GATCGTCGAG GATGATGCCA TTGTGGCGTC TCATTTGGAA 
CGGATCCTGG TGCAGTCGGG CTACTCGGTG GTGGGAATGG TCGCAACCGG TGAAGACGCC
GTGGAAAGGG CCCCCGTGCT CAGCCCCGCC ATCGTGCTCA TGGACATCCG GCTGATGGGC
GATATGAACG GCATCGAAGC CGCGGACAAG ATACGCTCCA GGCTCGACAT CCCCGTTATC
TACCTGACCG CCTACACCGA CCATGAGCTC CTGCGGCAGG CCAGGGCCAC GCAGCCATAC
GCCTACCTTA CCAAGCCGGT GCGGGACCGT GAGTTGTGCG CCGGCCTGGA AATGGCGCTC
TACAAACATG AAACCGACCG GAAAATACGG CACATCAACC AGGTCCTGCG GGCGATCCGG
GACGTGGATC AACTCATCAC ACGGGAGCGC AACCGAGAAC GGCTTTTGGA AGAAGCATGC
CAAATCCTGG TCCGAACGCG AGGTTACGTC ATGGTCTGGA TCGGACGGAC CGGGGAAGAC
GGGTTGAGTC TGGTTCCGGT GGCCCATGCC GGACAGGGAG CCGGCACTCT TGAGCAGGTC
ACGATGGGCT GGAGCCCCGA GGGTGCCCCG GAAAAGGCGA AGGCACACCC ACCCGGCACC
TGCCCGACGC TGGTGTGCCA GGACGTCGCC CGGGATCCGG CCTGCGGCGC CTACCGCGCC
GACGCCCTGC GCCGCGGCTA CGCTTCGTTT GCCATGGTGC CCATGATCAA CAGCGATCGA
CTCTATGGAA TGCTCAACGT CTACGCCAAC TGCCCCGGCG CTTTTTCGGA CGAAGAGCTG
GATCTCCTGC GCGAAGTGGC AGGGGACCTC GCCCTGGGGA TGCGGAGCAT CGAGGAAGAA
GAGGAACGCA AGCGCGCCGA AGACGCCCTG CGCGAAAGCG AAGCCCGCTT CCGCCTGCTC
GCCGAGAACT CCACGGACAT TATCTCCCGC CGTTTGCCGG ACGGGCGCAC CCTTTACGTG
TCTCCAGCCT GCCGCTCCGT GATGGGTTAC GAACCGGCGG AGCTGCAGGA ACTCTCCGCG
TTCGATTTCG TTCATCCCGA GGATCTGGAC CGGGTCTTGC GGGAATTTCA GGCCGCCGCT
TCCAGCCTTC GGCCCTTCCA CGTCGAGTAT CGAGTCCGGC GCAAGGACGG AGCGTACACA
TGGCTTGAGG CCAGGGGCCG CCCGATCGTC GACCAAACCA CAGGCGCCGT GGTCGAATTC
CATTCGTCCT CGCGCGACGT CTCGCAACGC AAACAGGAGG AGCAGGAGCG GGCGGCCCTT
GAAGAACGGC TGCGACAATC CCAGAAGATG GAGGCCATCG GCACGCTGGC GGGCGGAATC
GCCCATGACT TCAACAACCT CCTCATGGGC ATCCAGGGTT ACACCTCCAT CATGCTCTTT
GAAATGGACC GCAACCATCC CTACCACGAC AAGCTCAAAG CCATAGAGAG CCAGGTCCGA
AGCGGCGCGG AGCTCACCCG CCAACTCCTC GGCTTCGCTT ACAGCGGGAA ATATGAAACC
AAGCCCATCA ACGCGAACGA TCTCCTCGAA ACGACCGCCA CCATCTTCGG TCGGGCCAAG
CAGGAAATCA CGATCCTCAT GGATCTCGAT GCGGATCTTC GTGCGGTGGA GGTGGACCGG
GGGCAGATCG AACAGGTGCT GCTCAATCTC TATGTGAACG CCTGGCACGC CATGCCCGGC
GGAGGGGAGC TGCGCGCGGC ATCCCGGAAC GTGGAGCTCG ATGAAGACAC GGCGGCTCTT
CACGCCGTGG AACGGGGCGA GTACGTGGAA ATCGAGGTGA CCGACACCGG GATCGGGATG
GATCCTAAAA CCAGGGAAAG GGTTTTCGAA CCCTTCTTCA CTACGAAGGA AATGGGCAGG
GGAACCGGTC TCGGTCTCGC CTCCGCATAT GCCATCATCA AGAACCACGG CGGTTTCATG
GAAGTGCACA GCGAACCGGG CATCGGAACG ACGTTCAAGA TCTTTCTCCC CGCTTCGTCC
AAGCCCCCCG TGGGCACGAC ACAACCCGCG CAGGCCCCCC TGAAAGGCTC GGAGACCATC
CTCCTCGTCG ACGACCAGGA TATCGTCCTG GAGCCCACCA AGTGCATGCT CGAGACGCTC
GGCTACACGG TTTTCACCGC CATGAGCGGA GAGGAGGCGC TCGACATCTT CCGGGAATCC
GCCCGCTGCA TCGACCTGGT GATTCTTGAC ATGATCATGC CGGAATTGAG CGGAAGCGAC
ACCTATGACG AGCTGCGCGC GATGTCGCCC GGCGTGAAGG TGGTCCTTTC AAGCGGGTAC
AGCCTGAACG GGCAGGCGGA GACAATACTG GCGCGCGGCT GCAACGGGTT TATTCAGAAG
CCGTTCAACG TGACGGAATT GTCCCGCAAG CTCAGAGAAA TCCTCGACGG CTGA
 
Protein sequence
MDAAKVMIVE DDAIVASHLE RILVQSGYSV VGMVATGEDA VERAPVLSPA IVLMDIRLMG 
DMNGIEAADK IRSRLDIPVI YLTAYTDHEL LRQARATQPY AYLTKPVRDR ELCAGLEMAL
YKHETDRKIR HINQVLRAIR DVDQLITRER NRERLLEEAC QILVRTRGYV MVWIGRTGED
GLSLVPVAHA GQGAGTLEQV TMGWSPEGAP EKAKAHPPGT CPTLVCQDVA RDPACGAYRA
DALRRGYASF AMVPMINSDR LYGMLNVYAN CPGAFSDEEL DLLREVAGDL ALGMRSIEEE
EERKRAEDAL RESEARFRLL AENSTDIISR RLPDGRTLYV SPACRSVMGY EPAELQELSA
FDFVHPEDLD RVLREFQAAA SSLRPFHVEY RVRRKDGAYT WLEARGRPIV DQTTGAVVEF
HSSSRDVSQR KQEEQERAAL EERLRQSQKM EAIGTLAGGI AHDFNNLLMG IQGYTSIMLF
EMDRNHPYHD KLKAIESQVR SGAELTRQLL GFAYSGKYET KPINANDLLE TTATIFGRAK
QEITILMDLD ADLRAVEVDR GQIEQVLLNL YVNAWHAMPG GGELRAASRN VELDEDTAAL
HAVERGEYVE IEVTDTGIGM DPKTRERVFE PFFTTKEMGR GTGLGLASAY AIIKNHGGFM
EVHSEPGIGT TFKIFLPASS KPPVGTTQPA QAPLKGSETI LLVDDQDIVL EPTKCMLETL
GYTVFTAMSG EEALDIFRES ARCIDLVILD MIMPELSGSD TYDELRAMSP GVKVVLSSGY
SLNGQAETIL ARGCNGFIQK PFNVTELSRK LREILDG