More than 300 homologs were found in PanDaTox collection
for query gene Mboo_2407 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_2407  response regulator receiver protein  100 
 
 
182 aa  377  1e-104  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_2336  response regulator receiver protein  59.85 
 
 
355 aa  160  1e-38  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.404573  normal  0.642469 
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  54.76 
 
 
258 aa  152  4e-36  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  51.2 
 
 
352 aa  135  3.0000000000000003e-31  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  53.23 
 
 
461 aa  131  5e-30  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011831  Cagg_1360  putative PAS/PAC sensor protein  50.83 
 
 
429 aa  130  7.999999999999999e-30  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00110028  hitchhiker  0.000665614 
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  44.37 
 
 
238 aa  128  6e-29  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  48.85 
 
 
636 aa  127  8.000000000000001e-29  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  43.75 
 
 
257 aa  124  6e-28  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  52.71 
 
 
316 aa  124  7e-28  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  46.51 
 
 
386 aa  124  1e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  52.85 
 
 
255 aa  123  1e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  48.78 
 
 
701 aa  122  4e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.97 
 
 
704 aa  121  4e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  47.5 
 
 
143 aa  121  5e-27  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  49.6 
 
 
359 aa  121  6e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  47.69 
 
 
953 aa  120  7e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  47.11 
 
 
131 aa  120  9.999999999999999e-27  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  46.15 
 
 
591 aa  120  9.999999999999999e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  50.83 
 
 
355 aa  119  1.9999999999999998e-26  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  50 
 
 
701 aa  120  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  48.33 
 
 
130 aa  119  1.9999999999999998e-26  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  43.75 
 
 
380 aa  120  1.9999999999999998e-26  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  50.85 
 
 
336 aa  117  7e-26  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  46.28 
 
 
135 aa  117  7.999999999999999e-26  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  53.08 
 
 
196 aa  117  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4326  PAS/PAC sensor hybrid histidine kinase  47.58 
 
 
571 aa  116  1.9999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2639  multi-sensor hybrid histidine kinase  45.65 
 
 
817 aa  116  1.9999999999999998e-25  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  50.43 
 
 
340 aa  115  3e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  44.36 
 
 
989 aa  115  3.9999999999999997e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  50 
 
 
194 aa  115  5e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  44.6 
 
 
404 aa  114  6e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  40.94 
 
 
450 aa  114  6.9999999999999995e-25  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  46.72 
 
 
373 aa  113  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  47.46 
 
 
384 aa  113  1.0000000000000001e-24  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  51.22 
 
 
196 aa  113  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1725  multi-sensor signal transduction histidine kinase  45.59 
 
 
499 aa  113  1.0000000000000001e-24  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  42.65 
 
 
426 aa  113  2.0000000000000002e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_0573  response regulator receiver protein  35.63 
 
 
261 aa  112  2.0000000000000002e-24  Methanosphaerula palustris E1-9c  Archaea  normal  0.666159  normal  0.332219 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  45.83 
 
 
603 aa  112  2.0000000000000002e-24  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_009712  Mboo_1517  response regulator receiver protein  50 
 
 
127 aa  111  7.000000000000001e-24  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.394491  normal  0.160821 
 
 
-
 
NC_014230  CA2559_08681  transcriptional regulator  41.18 
 
 
240 aa  111  7.000000000000001e-24  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.803849  n/a   
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  44.36 
 
 
989 aa  110  8.000000000000001e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_007413  Ava_3003  PAS/PAC sensor hybrid histidine kinase  45.83 
 
 
498 aa  110  1.0000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  50.83 
 
 
455 aa  110  1.0000000000000001e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  42.22 
 
 
450 aa  110  1.0000000000000001e-23  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  46.4 
 
 
377 aa  109  2.0000000000000002e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  45.83 
 
 
352 aa  109  2.0000000000000002e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  45.76 
 
 
337 aa  109  2.0000000000000002e-23  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  50.83 
 
 
455 aa  109  2.0000000000000002e-23  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  45.53 
 
 
376 aa  109  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_011884  Cyan7425_4302  signal transduction histidine kinase  46.61 
 
 
343 aa  108  3e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.219335  normal  0.321802 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  46.22 
 
 
458 aa  108  5e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  45 
 
 
667 aa  107  8.000000000000001e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  45 
 
 
474 aa  106  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_009712  Mboo_1912  response regulator receiver protein  42.54 
 
 
263 aa  106  2e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.181503  normal  0.732361 
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  42.42 
 
 
472 aa  105  4e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  41.53 
 
 
429 aa  104  6e-22  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0834  response regulator receiver  43.33 
 
 
134 aa  103  2e-21  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000017528  n/a   
 
 
-
 
NC_007413  Ava_3669  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  31.74 
 
 
432 aa  102  3e-21  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0118  putative PAS/PAC sensor protein  31.18 
 
 
265 aa  101  5e-21  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_2032  response regulator receiver protein  43.22 
 
 
387 aa  100  1e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0686114 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  42.45 
 
 
204 aa  99.8  2e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3510  PAS/PAC sensor hybrid histidine kinase  41.3 
 
 
521 aa  98.2  5e-20  Polaromonas sp. JS666  Bacteria  normal  normal  0.269968 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  40.31 
 
 
561 aa  97.1  1e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  38.52 
 
 
245 aa  96.3  2e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_007575  Suden_0616  two component transcriptional regulator  38.17 
 
 
249 aa  96.7  2e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0883  response regulator receiver  37.41 
 
 
273 aa  96.3  2e-19  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_013730  Slin_3427  two component transcriptional regulator, LytTR family  34.71 
 
 
256 aa  96.3  2e-19  Spirosoma linguale DSM 74  Bacteria  normal  0.239231  normal 
 
 
-
 
NC_013730  Slin_3671  Sigma 54 interacting domain protein  37.41 
 
 
657 aa  96.3  2e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  41.22 
 
 
200 aa  95.9  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2510  transcriptional regulator  41.67 
 
 
157 aa  95.1  4e-19  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000843612  normal  0.354799 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  45.08 
 
 
197 aa  95.1  5e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  37.93 
 
 
210 aa  95.1  5e-19  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  40 
 
 
122 aa  94.7  6e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  37.93 
 
 
210 aa  94.7  6e-19  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  37.93 
 
 
210 aa  94.7  6e-19  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0268  sigma54 specific transcriptional regulator, Fis family  33.33 
 
 
651 aa  94.4  8e-19  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  31.25 
 
 
214 aa  93.6  1e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  41.74 
 
 
126 aa  92.8  2e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  41.86 
 
 
194 aa  92.4  3e-18  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  40.5 
 
 
194 aa  91.7  6e-18  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_009712  Mboo_1007  putative GAF sensor protein  45.53 
 
 
311 aa  91.3  7e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164021  normal  0.860345 
 
 
-
 
NC_007490  RSP_4195  response regulator receiver protein  43.33 
 
 
154 aa  91.3  8e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.81513  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  41.35 
 
 
195 aa  90.5  1e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  39.53 
 
 
191 aa  90.5  1e-17  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  41.86 
 
 
194 aa  90.1  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_007519  Dde_3002  putative PAS/PAC sensor protein  42.5 
 
 
469 aa  89.7  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.345319  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  37.98 
 
 
206 aa  89.7  2e-17  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  39.52 
 
 
199 aa  89.4  3e-17  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  38.35 
 
 
229 aa  89.4  3e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  37.82 
 
 
199 aa  89  4e-17  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007796  Mhun_2576  response regulator receiver domain-containing protein  39.5 
 
 
122 aa  89  4e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  37.98 
 
 
206 aa  89  4e-17  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  39.37 
 
 
201 aa  88.6  5e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  38.76 
 
 
207 aa  88.2  6e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  38.66 
 
 
220 aa  87.8  7e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  38.06 
 
 
205 aa  87.8  8e-17  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  37.8 
 
 
229 aa  87.4  1e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  39.66 
 
 
247 aa  87.4  1e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>