| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1488 |
|---|
| Symbol | |
|---|
| ID | 5410408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1539140 |
|---|
| End bp | 1540492 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640868723 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001404649 |
|---|
| Protein GI | 154151031 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.379239 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAAA TACTTGTTGT AGATGATGAA GCAATCATAA TGATGCAGCT GGAAAAAAGG
CTGACCGCGA TGGGATATAT CATTGCAGGT ATGGCGTCTT CCGGTGAAGA GGCAGTCGCC
AAGGCCCGGA ATATACGGCC TGATCTTGTG CTGATGGATA TCGTGATGCC GGGAAATATG
AATGGCATTG AAGCAGCAGG GGTCATGAGG GGGGAACTGA ATATTCCGGT TATTTTTATC
ACCGCGTACG CTGACGATGC CATTATTGAA GCAGCAAAAA GTGTCCGCCC CTATGGCTAT
ATTGTCAAAC CCTTCAATGA GCTGGGAATC AAGGCAGCCA TTGAAATGGC AATGTTCCGA
AGAGGAATAG AACATGAGGA GCAGAAATCG GGAAAATCTG CACCGGAAAA AATTGTGACG
GGTGCAGACG GCGGCACGCT GGTACAAAAT GATCTTTCCT ATCATGACCT GCCGGAAATA
AAGACCATAC TTTTAACCGA TATCTTCACG GACCTCGTTA TCTTCCTCTA CACGGATCAA
ATCATAAAAG AACCAATATT CAAATTTGCG CTGGAAGAGG GCCTTAAAAA GGGAGGACGC
AACCTGTTTG CCTATTCCCA TTCAACACTC CAGAAATATT TCCCAAAAGA GATCCTCAAA
AAGGAGCTGT ACACCTACCG GATAAAAAGA AATGAAGTTT CCGCCCTGCT GCCCGTCATT
GATAAGTGCA CTGAATCCCT GCTCTATCCG GGTTCAACCG ATTCATTGCA AATCCTGCTG
GACTTTTCTG AAAGCGATGA GTTCGATGAT ATCCTTGCCA TAAAGGATCT GCTCCTTTCA
AAAAAGGAGA GACATACCCC GGTATCCGGG ATCATTGCCA TGAATATCGG GAAAATTGAT
CATACCCTGA TACAATCCCT AGCCCGGGGG ATTCCCAAGA TTATCGTGTC AACCGGGAAA
GAAACGTCCC TTTCGTTTGC CCATCATTCA TTTCCTGCCG AATCTATTTC GGTTGTTCCC
CAGTCAACCA TCGATGATGT CGTAAAAAAA TCACTGGAAC CGGTGGTCCT TTCTCTTCTG
GATAAACCGA TTTCAGGATA TGATATCGTT CACGAGATTC ACAGCCGGTA CAATGTGCTT
ATTCCGCATG CAAGGATTTA CACCATTCTC CATGATCTTC AGGAAAAAGG GGACCTTGAG
ATTATTACTT CAGGAAAATC CAAATTGTAT AGTCTTACTG TAAACGGGAA GAAAAATATC
GACCAGAAGC TCAATGACTT CCAGCAGGTC TTCCAGCATA TTATATCGGA CAAACGAGGA
TTAACTGCGG ACAAGAAGGA TAAAAAAATA TGA
|
|---|
| Protein sequence | MVKILVVDDE AIIMMQLEKR LTAMGYIIAG MASSGEEAVA KARNIRPDLV LMDIVMPGNM
NGIEAAGVMR GELNIPVIFI TAYADDAIIE AAKSVRPYGY IVKPFNELGI KAAIEMAMFR
RGIEHEEQKS GKSAPEKIVT GADGGTLVQN DLSYHDLPEI KTILLTDIFT DLVIFLYTDQ
IIKEPIFKFA LEEGLKKGGR NLFAYSHSTL QKYFPKEILK KELYTYRIKR NEVSALLPVI
DKCTESLLYP GSTDSLQILL DFSESDEFDD ILAIKDLLLS KKERHTPVSG IIAMNIGKID
HTLIQSLARG IPKIIVSTGK ETSLSFAHHS FPAESISVVP QSTIDDVVKK SLEPVVLSLL
DKPISGYDIV HEIHSRYNVL IPHARIYTIL HDLQEKGDLE IITSGKSKLY SLTVNGKKNI
DQKLNDFQQV FQHIISDKRG LTADKKDKKI
|
|---|
| |