| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3008 |
|---|
| Symbol | |
|---|
| ID | 4574298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3280890 |
|---|
| End bp | 3283751 |
|---|
| Gene Length | 2862 bp |
|---|
| Protein Length | 953 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639757062 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_902663 |
|---|
| Protein GI | 118581413 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA TGGAACCGGC AACGCACAGG AACAGGATAC TGATCGTCGA GGACGAGCTG
ATCATCGCCA GGGGTATCCA GAAGCGTCTG CAGGGCATGG GATACGACGT GATCGATATC
GTCCCTTCTG GTGAGGAGGC GATTCAGAGC GCAACGGAGA ATCCTCCGGA CCTGGTTCTC
ATGGATATCA ACCTCCAGGG GAGCATGGAC GGAATCCAGG CGGCGGAGAG CATTCGTTCC
CGGCTGGACC TTCCGGTGAT CTACCTCACC GCCTATACGG ACGCCGAGTC CCTGGGGCGG
GCCAAGGTGA CGGAGCCGTT CGGTTACATC GTCAAGCCGT TTCAGGACCA TACCCTGCAG
TCGGCCATCG AGATGGCCCT CTACAAGCAC CGCATGGAGA GCCGGCTTAA GAAAAGCGAG
CAGTGGCTGG CCACCACCCT GCGCAGCATC GGAGACGCGG TGGTCACCAC GGATGTGTCC
GGACTGGTCA GCTACGTGAA TCCCGTGGCG GAAGAACTGA TTGGCCTCAC ACAGGAAGTG
GCGCTGGGAA GGCCGTTGGA GGAACTGTTC CGCTACCGGA GCGAAATCAG TATGTTGACC
GCGGAGGAGA TAGTCGGCAG GGTGGTCGGT GCGGGGGAGA CGGTGGTGCT GCCGGTCGAT
AGCGTGCTGA TGACCGAATC GGGGAAAACG GTTCCCATCG AGGCCAGGCT AACCCCCATC
TCGGGCGGCA GGGAGGATAT CCTGGGCATG GTACTGGTCA TGCTCGACGT TACCGCTCAG
CGCAGGACCG AGCAGGCGCT CAGGCGCTCG GAGCGGATCC TGACGCTGAA AAACCAGATC
GCCAACATAT TCCTGGCCAC TCCCGATGAG CAGATGTTCT CCCAGGTGCT GTCGGTAATC
CGTGATGCCA TCGACTGCGC CCATGCCCTG TTCGGCTACA TCGACGAAGA TGGCGCCCTG
GTGGTTCCCA CTCTGATGGG GGCGGTGTGG CAGGAGTGCC TGATTCCGGA CAAGACGATC
CGTTTTTCCT CCGACAGCTG GTCCGGACTG TGGGGCCGTG CCCTGCGGGA GCAGGTCTCG
TGTTGCGGTG ACGGCCCCTT CTCGGTGCCG CAGGGGCACA TCGACATCGA TAATTTTCTC
GCGATTCCGG TTGTGTACCG CGGGGCCAGC ATCGGCCTGA TCGCCTTGGC GAACAAGCCG
GGAGGGTTCG GCGATGGCGA GCGGGAGCTG CTTGAGATCA TCGCCGACCG CATCTCCCCG
ATTCTGCAGG CGCGCCTGGA GCGCGACCGG CTGGAGCGGA AACGCGGGGA GGCCGCCGAA
GCCCTTGCCA CGGAGAAGGA GCGTCTGGCG GTGACGCTGC GTTCCATTGG TGACGGGGTG
ATCACCACCG ATACCAGCGG GATGGTGGTG TTGCTCAACA GGGCCGCCGA GGAGATGACC
GGCTGGACGC AGGAAGAGGC GGCGGGAAAG CCGTTTCAGG ATGTGTTCCG GATCATCAAC
GAAAAGAGCC GGGAATGCTG TCCCAGCCCG GTGGAGCAGG TGCTTGCCGA CGGGGTGGTG
GTGGAGCTTG CCAACCACAC CCTCCTGATC GCCAGGGACG GCGGAGAGCG GGTCATCGCC
GACAGCGGCG CGCCGATTCG TGACCGACAG AGCCGGCTGG TGGGGGTCGT GCTGGTGTTC
CGCGACATCA CCGAGAAGAA GAAGATGGAG GAGGAGCTCT TCAATGCCCG TAAGCTGGAC
TCCATCGGAC TCCTGGCCGG TGGCATTGCC CACGACTTCA ACAACCTGCT CACCTCCATA
CTGGGCAATA TCTCCCTCAC CAGGATGCAG GTCGGCGAGG GGGACAGGCT GAGGCGAAAC
CTGGATGAGG CGGAAAAGGC CTCTTTGCGG GCCAAGGACC TGACCCAGCA GCTGCTGACC
TTCTCCCGTG GCGGAGCACC GGTGCGCAAG ACCGTTTCCC TGACCGCCAT CATCAGGGAC
TCTGCCACCT TCACCCTGTC CGGTTCCCGG ACCACCTGCC GATTCCAGAT CCCCGACGAC
CTGTACCCGG TGGATGTTGA CGAGGGGCAG TTCAGCCAGG TGATCAACAA CCTGGTGCTC
AACGCCGATC AGGCCATGCC CGCCGGGGGG GAGATCGAGA TCGTCTGCGC CAATGTCACC
CTGGCCAGGG AGTCCCATCT GCCGCTACCG GCGGGCGCCT ATGTGCGTAT CAGCGTCAGG
GACCGGGGGG AGGGGATTCC GGAGGAGCTC GTCCCCCGCA TCTTCGATCC CTACTTCACC
ACAAAGAAGG AGGGCAAGGG GCTGGGGCTG GCAACGGTCT ACTCCATCAT TAGGAATCAC
GACGGTCATA TCAGTGTCAG CTCATCCCCG GGACAGGGGA CCGCGTTCAC CATCCATCTC
CCCGCCACCG TCAGCGGCAT GGTGGCGGCG GCTCCCGTGG AGACGTCGAC CACACCCGGC
AAAGGGCGTA TCCTGGTCAT GGATGACGAG GAGAGTATTC GTGAGGTGGC TGGCGAGATG
CTCTCCTATC TGGGGTATGA GGTGGTCTTT GCCCGTGACG GCGCCGAGGC GGTGGAGTTG
TACCGTGTGG CGCAGGAGGG GGAGCACACC TTTTCGGCCC TGCTGATGGA TCTGACCATT
CCGGGAGGCA TGGGGGGGAA GGATGCCATC GCCCTGTTGC GGGAGATGGA TCAATCGGTT
GTGGCGGTGG TTTCCAGCGG CTATTCCAAC GACCCGATCA TGGCCGATTA CCGGGCATAC
GGCTTCAGCG GGGTGATCAC CAAGCCGTAC CGGCTGACCG AGCTGAAGCG GGTGCTGGAT
GGGGTCATCG CCCGGCAGGA AAATACGGGG GACGCGGCAT GA
|
|---|
| Protein sequence | MADMEPATHR NRILIVEDEL IIARGIQKRL QGMGYDVIDI VPSGEEAIQS ATENPPDLVL
MDINLQGSMD GIQAAESIRS RLDLPVIYLT AYTDAESLGR AKVTEPFGYI VKPFQDHTLQ
SAIEMALYKH RMESRLKKSE QWLATTLRSI GDAVVTTDVS GLVSYVNPVA EELIGLTQEV
ALGRPLEELF RYRSEISMLT AEEIVGRVVG AGETVVLPVD SVLMTESGKT VPIEARLTPI
SGGREDILGM VLVMLDVTAQ RRTEQALRRS ERILTLKNQI ANIFLATPDE QMFSQVLSVI
RDAIDCAHAL FGYIDEDGAL VVPTLMGAVW QECLIPDKTI RFSSDSWSGL WGRALREQVS
CCGDGPFSVP QGHIDIDNFL AIPVVYRGAS IGLIALANKP GGFGDGEREL LEIIADRISP
ILQARLERDR LERKRGEAAE ALATEKERLA VTLRSIGDGV ITTDTSGMVV LLNRAAEEMT
GWTQEEAAGK PFQDVFRIIN EKSRECCPSP VEQVLADGVV VELANHTLLI ARDGGERVIA
DSGAPIRDRQ SRLVGVVLVF RDITEKKKME EELFNARKLD SIGLLAGGIA HDFNNLLTSI
LGNISLTRMQ VGEGDRLRRN LDEAEKASLR AKDLTQQLLT FSRGGAPVRK TVSLTAIIRD
SATFTLSGSR TTCRFQIPDD LYPVDVDEGQ FSQVINNLVL NADQAMPAGG EIEIVCANVT
LARESHLPLP AGAYVRISVR DRGEGIPEEL VPRIFDPYFT TKKEGKGLGL ATVYSIIRNH
DGHISVSSSP GQGTAFTIHL PATVSGMVAA APVETSTTPG KGRILVMDDE ESIREVAGEM
LSYLGYEVVF ARDGAEAVEL YRVAQEGEHT FSALLMDLTI PGGMGGKDAI ALLREMDQSV
VAVVSSGYSN DPIMADYRAY GFSGVITKPY RLTELKRVLD GVIARQENTG DAA
|
|---|
| |