More than 300 homologs were found in PanDaTox collection
for query gene Strop_3151 on replicon NC_009380
Organism: Salinispora tropica CNB-440



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_3151  response regulator receiver  100 
 
 
206 aa  400  1e-111  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  96.59 
 
 
206 aa  388  1e-107  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  75.39 
 
 
207 aa  293  2e-78  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  72.36 
 
 
207 aa  290  9e-78  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  72.49 
 
 
212 aa  283  2.0000000000000002e-75  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  70.92 
 
 
204 aa  277  8e-74  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2955  response regulator  70.37 
 
 
199 aa  273  9e-73  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  68.98 
 
 
197 aa  271  4.0000000000000004e-72  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  71.05 
 
 
199 aa  271  5.000000000000001e-72  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  71.89 
 
 
200 aa  271  6e-72  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  69.74 
 
 
210 aa  271  7e-72  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  69.74 
 
 
210 aa  271  7e-72  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  69.74 
 
 
210 aa  270  8.000000000000001e-72  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  70.21 
 
 
214 aa  270  2e-71  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  68.42 
 
 
199 aa  265  2.9999999999999995e-70  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  69.15 
 
 
205 aa  265  2.9999999999999995e-70  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  65.08 
 
 
220 aa  265  4e-70  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  65.31 
 
 
229 aa  263  1e-69  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  69.59 
 
 
229 aa  263  1e-69  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  69.84 
 
 
200 aa  262  2e-69  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  70.65 
 
 
213 aa  262  2e-69  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  65.64 
 
 
210 aa  256  1e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  68.48 
 
 
194 aa  256  1e-67  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  63.98 
 
 
229 aa  256  2e-67  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  62.23 
 
 
227 aa  253  1.0000000000000001e-66  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  62.96 
 
 
226 aa  253  2.0000000000000002e-66  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  63.24 
 
 
201 aa  251  5.000000000000001e-66  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  63.24 
 
 
201 aa  250  1e-65  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  70.21 
 
 
207 aa  246  1e-64  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  64.29 
 
 
247 aa  245  3e-64  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  62.77 
 
 
220 aa  245  3e-64  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  66.12 
 
 
205 aa  244  4e-64  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  63.68 
 
 
206 aa  245  4e-64  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  56.25 
 
 
215 aa  234  6e-61  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  60.33 
 
 
198 aa  231  6e-60  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  54.95 
 
 
191 aa  209  2e-53  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  53.19 
 
 
189 aa  208  4e-53  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  52.15 
 
 
194 aa  208  4e-53  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  53.85 
 
 
197 aa  207  1e-52  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  52.15 
 
 
194 aa  204  6e-52  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  54.4 
 
 
195 aa  203  1e-51  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  44.81 
 
 
249 aa  187  1e-46  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  45.59 
 
 
261 aa  182  2.0000000000000003e-45  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  52.11 
 
 
203 aa  181  8.000000000000001e-45  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  46.15 
 
 
194 aa  170  1e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2822  response regulator  48.09 
 
 
191 aa  167  1e-40  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  49.18 
 
 
194 aa  164  8e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  41.94 
 
 
194 aa  160  1e-38  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
196 aa  160  1e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  45.36 
 
 
196 aa  159  2e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
188 aa  159  4e-38  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  44.26 
 
 
187 aa  158  6e-38  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  44.26 
 
 
202 aa  158  6e-38  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  43.81 
 
 
221 aa  157  1e-37  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  42.31 
 
 
198 aa  155  4e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  44.51 
 
 
208 aa  153  1e-36  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  37.88 
 
 
242 aa  153  2e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  43.96 
 
 
220 aa  149  4e-35  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  39.67 
 
 
192 aa  147  7e-35  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  43.85 
 
 
218 aa  145  3e-34  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_008261  CPF_0888  response regulator  37.3 
 
 
191 aa  145  4.0000000000000006e-34  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  40.76 
 
 
205 aa  145  4.0000000000000006e-34  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  43.32 
 
 
198 aa  144  8.000000000000001e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  42.05 
 
 
243 aa  141  6e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  36.61 
 
 
195 aa  140  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  37.91 
 
 
194 aa  139  3.9999999999999997e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  39.56 
 
 
192 aa  137  7.999999999999999e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  36.41 
 
 
190 aa  125  3e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  39.04 
 
 
198 aa  118  4.9999999999999996e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  42.96 
 
 
159 aa  115  5e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  38.38 
 
 
191 aa  111  7.000000000000001e-24  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  37.82 
 
 
636 aa  110  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  35.87 
 
 
191 aa  109  2.0000000000000002e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  35.33 
 
 
194 aa  105  4e-22  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  43.7 
 
 
316 aa  100  2e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_010424  Daud_1738  response regulator receiver protein  42.02 
 
 
122 aa  98.6  5e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  32.74 
 
 
191 aa  98.2  7e-20  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  30.05 
 
 
191 aa  98.2  8e-20  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  41.6 
 
 
359 aa  96.7  2e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2382  response regulator receiver protein  43.7 
 
 
122 aa  97.1  2e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  42.86 
 
 
122 aa  97.1  2e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  42.86 
 
 
461 aa  96.3  3e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  40.5 
 
 
352 aa  95.9  4e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  42.4 
 
 
380 aa  95.5  4e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  40.68 
 
 
704 aa  95.5  5e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  43.7 
 
 
123 aa  95.5  5e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0863  response regulator receiver protein  46.15 
 
 
120 aa  95.1  6e-19  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1321  response regulator receiver protein  45.3 
 
 
120 aa  94  1e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0803  response regulator receiver domain-containing protein  42.5 
 
 
120 aa  93.6  2e-18  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.02 
 
 
701 aa  93.2  2e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0715  response regulator receiver protein  40.5 
 
 
121 aa  93.6  2e-18  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  40.34 
 
 
426 aa  93.2  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0531  response regulator receiver protein  43.97 
 
 
120 aa  92.8  3e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1439  response regulator receiver domain-containing protein  40.68 
 
 
120 aa  92.4  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  46.61 
 
 
232 aa  92.4  4e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  42.52 
 
 
355 aa  92  5e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_009253  Dred_2115  response regulator receiver protein  36.36 
 
 
412 aa  91.7  7e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1040  response regulator receiver protein  48.7 
 
 
391 aa  91.3  8e-18  Ammonifex degensii KC4  Bacteria  normal  0.369353  n/a   
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  40.68 
 
 
450 aa  91.7  8e-18  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_012034  Athe_2159  response regulator receiver protein  41.67 
 
 
120 aa  91.3  9e-18  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00200925  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>