Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0888 |
Symbol | |
ID | 4201426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1053227 |
End bp | 1053802 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638081770 |
Product | response regulator |
Protein accession | YP_695337 |
Protein GI | 110800556 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA CTATAGTAAT AGTCGATGAT GAGCCTATTA CAAGAATGGA TACAAGAGAA ATTTTAGAGG CTAATGGATA CGATGTTGTA GGAGAGGCTT CTGATGGTTT TGAAGCAATT GAAGTTTGTA AGAAATATAA TCCTAGCTTA GTTTTAATGG ACATAGATAT GCCTTTATTA GATGGAATAA AAGCTAGTAA GGTATTAACT AAGGAAAAAT TAGTTGGGGG CGTAATATTA TTAACAGCAT TTGAAGACAA AAAGTATATT GAAATGGCTA AAGAAGTAGG AGCCTTTGGA TATATGATTA AGCCTGTAAA TGAGAAGGTA TTTATTCCTA CTGTAGAAAT GTGCTTATCA AAGGCAGAAG AATTTGATGA ACTAAAAAAA GATTATGATA AAATAAACAA TAAATTAAAT GATAGAAAGT TAATAGAGAA GGCAAAAGGA ATACTTGTTA AGCAATTAAA CTCAAATGAG AATGATGCTT ATAACAGAAT AAGAAAATTA AGTATGGATA GAAGAACTAC CATGGCTGAA ATAGCAAAAA TAATAATTGT TGGTTATGAG GGATAA
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Protein sequence | MKRTIVIVDD EPITRMDTRE ILEANGYDVV GEASDGFEAI EVCKKYNPSL VLMDIDMPLL DGIKASKVLT KEKLVGGVIL LTAFEDKKYI EMAKEVGAFG YMIKPVNEKV FIPTVEMCLS KAEEFDELKK DYDKINNKLN DRKLIEKAKG ILVKQLNSNE NDAYNRIRKL SMDRRTTMAE IAKIIIVGYE G
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