More than 300 homologs were found in PanDaTox collection
for query gene Dred_1289 on replicon NC_009253
Organism: Desulfotomaculum reducens MI-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  100 
 
 
221 aa  450  1.0000000000000001e-126  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  47.8 
 
 
207 aa  168  6e-41  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  43.65 
 
 
201 aa  163  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  46.7 
 
 
210 aa  163  2.0000000000000002e-39  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  45.65 
 
 
201 aa  163  2.0000000000000002e-39  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  46.7 
 
 
210 aa  163  2.0000000000000002e-39  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  46.7 
 
 
210 aa  163  2.0000000000000002e-39  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  45.05 
 
 
214 aa  162  4.0000000000000004e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  47.25 
 
 
229 aa  162  4.0000000000000004e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  45.6 
 
 
229 aa  162  5.0000000000000005e-39  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  42.65 
 
 
227 aa  161  8.000000000000001e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  46.7 
 
 
213 aa  160  1e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  45.05 
 
 
212 aa  160  2e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  42.7 
 
 
189 aa  159  2e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  44.26 
 
 
247 aa  160  2e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  40.98 
 
 
197 aa  160  2e-38  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  45.05 
 
 
229 aa  159  3e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  45.6 
 
 
199 aa  158  6e-38  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  43.96 
 
 
200 aa  158  7e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  46.49 
 
 
195 aa  157  8e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  45.65 
 
 
220 aa  157  9e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  45.6 
 
 
199 aa  157  2e-37  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  41.62 
 
 
210 aa  157  2e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  43.81 
 
 
206 aa  157  2e-37  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  45.6 
 
 
205 aa  156  2e-37  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  45.05 
 
 
226 aa  157  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  43.55 
 
 
200 aa  155  4e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  44.92 
 
 
198 aa  155  4e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_010816  BLD_0739  putative response regulator  41.67 
 
 
261 aa  154  7e-37  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  44.02 
 
 
220 aa  153  2e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  42.78 
 
 
206 aa  153  2e-36  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  42.31 
 
 
204 aa  152  2.9999999999999998e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  42.86 
 
 
197 aa  152  4e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2955  response regulator  42.86 
 
 
199 aa  151  5.9999999999999996e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  41.62 
 
 
194 aa  151  8e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0888  response regulator  41.21 
 
 
191 aa  149  2e-35  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  42.86 
 
 
194 aa  149  2e-35  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  43.48 
 
 
215 aa  149  5e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  41.08 
 
 
194 aa  146  2.0000000000000003e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  40.69 
 
 
249 aa  145  5e-34  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  40.54 
 
 
207 aa  144  9e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  41.21 
 
 
191 aa  143  2e-33  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  45.05 
 
 
207 aa  143  2e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  41.76 
 
 
205 aa  142  3e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  41.21 
 
 
206 aa  140  9.999999999999999e-33  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  36.81 
 
 
196 aa  139  3e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  38.8 
 
 
194 aa  139  3e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  38.62 
 
 
203 aa  139  4.999999999999999e-32  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  37.36 
 
 
196 aa  137  2e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  34.97 
 
 
198 aa  135  6.0000000000000005e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  36.02 
 
 
242 aa  134  9.999999999999999e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  34.97 
 
 
195 aa  131  7.999999999999999e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  35.87 
 
 
198 aa  130  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  38.2 
 
 
192 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2822  response regulator  35.91 
 
 
191 aa  127  2.0000000000000002e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  40 
 
 
194 aa  126  2.0000000000000002e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  33.7 
 
 
202 aa  120  9.999999999999999e-27  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  34.59 
 
 
194 aa  120  9.999999999999999e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  39.04 
 
 
159 aa  116  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  32.6 
 
 
188 aa  116  1.9999999999999998e-25  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  34.07 
 
 
194 aa  115  6.9999999999999995e-25  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  32.24 
 
 
220 aa  113  3e-24  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  31.87 
 
 
205 aa  111  1.0000000000000001e-23  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  34.07 
 
 
192 aa  106  2e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  41.43 
 
 
636 aa  107  2e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  30.69 
 
 
195 aa  106  3e-22  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  33.87 
 
 
190 aa  105  5e-22  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  34.07 
 
 
187 aa  104  1e-21  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  42.34 
 
 
667 aa  104  1e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  33.52 
 
 
191 aa  101  9e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  31.18 
 
 
224 aa  98.6  7e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  46.55 
 
 
218 aa  97.1  2e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  33.01 
 
 
218 aa  96.3  3e-19  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  45.37 
 
 
207 aa  95.9  4e-19  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  28.11 
 
 
208 aa  95.5  6e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  40.35 
 
 
1066 aa  94.7  1e-18  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  32.59 
 
 
386 aa  93.6  2e-18  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007484  Noc_1494  response regulator  30.22 
 
 
194 aa  94  2e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  31.69 
 
 
352 aa  94  2e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  39.39 
 
 
359 aa  93.6  2e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  38.14 
 
 
426 aa  94  2e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  39.83 
 
 
218 aa  92.8  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  36.99 
 
 
337 aa  92.8  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_008751  Dvul_2052  putative PAS/PAC sensor protein  36.43 
 
 
414 aa  92.4  4e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.948346  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  30.05 
 
 
191 aa  92  6e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_014151  Cfla_3222  two component transcriptional regulator, LuxR family  45.05 
 
 
218 aa  92  7e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000001545 
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  31.87 
 
 
191 aa  91.7  8e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  45.87 
 
 
220 aa  91.7  8e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  35.43 
 
 
225 aa  91.7  8e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  46.43 
 
 
217 aa  91.7  9e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  45.6 
 
 
232 aa  90.9  2e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  36.29 
 
 
211 aa  90.9  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  40.87 
 
 
701 aa  90.5  2e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  34.12 
 
 
430 aa  90.1  2e-17  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_012029  Hlac_2262  response regulator receiver modulated CheB methylesterase  37.41 
 
 
379 aa  90.1  2e-17  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  hitchhiker  0.00869886 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  33.14 
 
 
603 aa  90.1  2e-17  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  43.93 
 
 
213 aa  89.7  3e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  46.53 
 
 
225 aa  89.4  4e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  46.6 
 
 
241 aa  89  5e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  38.76 
 
 
234 aa  89  6e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
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