More than 300 homologs were found in PanDaTox collection
for query gene Namu_3061 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  100 
 
 
194 aa  382  1e-105  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  72.34 
 
 
200 aa  285  4e-76  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  72.73 
 
 
204 aa  283  1.0000000000000001e-75  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  70.37 
 
 
210 aa  276  1e-73  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  70.59 
 
 
210 aa  276  2e-73  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  70.59 
 
 
210 aa  276  2e-73  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  71.66 
 
 
229 aa  274  5e-73  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  70.59 
 
 
213 aa  273  2.0000000000000002e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  69.68 
 
 
205 aa  270  1e-71  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  69.43 
 
 
199 aa  268  2.9999999999999997e-71  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  67.89 
 
 
199 aa  263  1e-69  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  68.82 
 
 
207 aa  262  3e-69  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  68.48 
 
 
206 aa  256  1e-67  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  69.35 
 
 
207 aa  255  2e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  64.4 
 
 
206 aa  256  2e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  67.93 
 
 
206 aa  255  3e-67  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_013595  Sros_2955  response regulator  66.14 
 
 
199 aa  255  3e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  64.21 
 
 
227 aa  253  2.0000000000000002e-66  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  64.89 
 
 
220 aa  251  5.000000000000001e-66  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  66.31 
 
 
214 aa  251  5.000000000000001e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  67.2 
 
 
200 aa  251  6e-66  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  63.83 
 
 
212 aa  250  1e-65  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  65.22 
 
 
205 aa  249  2e-65  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  64.36 
 
 
197 aa  249  2e-65  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  63.04 
 
 
229 aa  246  1e-64  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  62.83 
 
 
210 aa  243  9.999999999999999e-64  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  61.96 
 
 
226 aa  241  3.9999999999999997e-63  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  63.04 
 
 
220 aa  239  2e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  66.67 
 
 
247 aa  239  2e-62  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  67.76 
 
 
207 aa  237  8e-62  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  62.3 
 
 
229 aa  237  1e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  59.36 
 
 
201 aa  233  9e-61  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  59.56 
 
 
201 aa  233  1.0000000000000001e-60  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  58.12 
 
 
215 aa  229  2e-59  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  61.75 
 
 
198 aa  225  3e-58  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  51.65 
 
 
197 aa  211  7e-54  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  57.38 
 
 
189 aa  205  4e-52  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  51.87 
 
 
194 aa  204  8e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  53.3 
 
 
191 aa  203  1e-51  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  51.34 
 
 
194 aa  200  9.999999999999999e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  53.85 
 
 
195 aa  199  1.9999999999999998e-50  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_010816  BLD_0739  putative response regulator  48.06 
 
 
261 aa  188  5e-47  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  51.31 
 
 
203 aa  182  2.0000000000000003e-45  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  45.1 
 
 
249 aa  179  2.9999999999999997e-44  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_002939  GSU2822  response regulator  48.66 
 
 
191 aa  177  7e-44  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  46.99 
 
 
202 aa  172  1.9999999999999998e-42  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  50.27 
 
 
218 aa  172  3.9999999999999995e-42  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  48.09 
 
 
194 aa  169  3e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  44.62 
 
 
196 aa  165  5e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  47.06 
 
 
194 aa  162  2.0000000000000002e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  49.19 
 
 
243 aa  162  4.0000000000000004e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  43.01 
 
 
196 aa  160  1e-38  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  42.93 
 
 
198 aa  159  2e-38  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  44.81 
 
 
188 aa  158  5e-38  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  40.22 
 
 
192 aa  155  5.0000000000000005e-37  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  42.86 
 
 
221 aa  149  2e-35  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  41.08 
 
 
205 aa  149  3e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  42.62 
 
 
187 aa  145  3e-34  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  38.67 
 
 
194 aa  142  2e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  37.37 
 
 
242 aa  142  4e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  35.33 
 
 
191 aa  141  5e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  39.56 
 
 
220 aa  141  7e-33  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  37.36 
 
 
208 aa  138  6e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  35.71 
 
 
194 aa  134  8e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  36.36 
 
 
192 aa  134  9.999999999999999e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  32.79 
 
 
195 aa  131  6.999999999999999e-30  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  42.39 
 
 
198 aa  130  2.0000000000000002e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  45.38 
 
 
159 aa  115  5e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.71 
 
 
191 aa  114  7.999999999999999e-25  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  38.04 
 
 
198 aa  114  1.0000000000000001e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  31.69 
 
 
190 aa  113  2.0000000000000002e-24  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  32.79 
 
 
191 aa  103  1e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  33.15 
 
 
191 aa  103  2e-21  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  39.44 
 
 
352 aa  101  7e-21  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  35.29 
 
 
198 aa  100  9e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  45.76 
 
 
636 aa  100  1e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  35.29 
 
 
198 aa  100  1e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  30.49 
 
 
224 aa  100  1e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  34.07 
 
 
191 aa  99.8  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  38.61 
 
 
380 aa  99.8  2e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_007511  Bcep18194_B1340  response regulator receiver/ANTAR domain-containing protein  34.24 
 
 
198 aa  99.4  3e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.579049 
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  29.03 
 
 
191 aa  97.8  8e-20  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  33.94 
 
 
191 aa  97.4  1e-19  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  34.32 
 
 
198 aa  96.3  2e-19  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
NC_008061  Bcen_3858  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
219 aa  96.3  2e-19  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.853052  n/a   
 
 
-
 
NC_010515  Bcenmc03_5794  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
198 aa  96.3  2e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4510  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
219 aa  96.3  2e-19  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000166869  normal 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  32.42 
 
 
191 aa  96.3  3e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_010086  Bmul_4144  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
201 aa  95.5  4e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.071014 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  35.81 
 
 
461 aa  95.5  4e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  36.42 
 
 
377 aa  94.7  6e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  48.72 
 
 
220 aa  94.7  7e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1494  response regulator  30.27 
 
 
194 aa  94.4  9e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  27.27 
 
 
195 aa  94.4  1e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2115  response regulator receiver protein  45.87 
 
 
412 aa  94.4  1e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  43.33 
 
 
429 aa  93.2  2e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  41.67 
 
 
450 aa  93.2  2e-18  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  32.94 
 
 
198 aa  93.2  2e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  32.94 
 
 
198 aa  93.2  2e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  32.94 
 
 
198 aa  93.2  2e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>