| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4403 |
|---|
| Symbol | |
|---|
| ID | 6180489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1484964 |
|---|
| End bp | 1485560 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641684164 |
|---|
| Product | response regulator receiver/ANTAR domain-containing protein |
|---|
| Protein accession | YP_001811075 |
|---|
| Protein GI | 172063424 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.155669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGC CTGTTCCTCC CCCCCGCCTG CGCGTGCTGC TTGTCACCGA CACCGACAAG
CCGATCGGCG AGCTCGGTGA CGCGCTCGCG CGCCTCGGCT ACGAAATGCT CAACGACGTC
GCGACGCCCG CGCGCCTGCC GGCCGCCGTC GAGGAGCAGC GCCCCGACGT CGTGATCATC
GACACCGATT CGCCGTCGCG CGACACGCTC GAGCAACTCG CCGTGATGCA CGCCACGGCG
CCGCGCCCCG TGCTGATGTT CAGCCACGAT GCCGATCAGG ACCTGATTCA CGCGGCGGTC
GGCGCGGGAG TCAGCGCGTA TCTCGTCGAA GGGCTGTCGG CCGAGCGTCT CGCGCCGATC
CTCGAAGTCG CGCTCGCGCG CTTCTCGCAC GACGATGCGC TGCGCCGCCG GCTCGCCGAC
GTCGAGCGCG AACTCGCCGA GCGCAAGCTG ATCGATCGCG CGAAGCGCCT GCTGATGGAC
CAGCGCAAGC TGTCCGAACA CGATGCGTAT GCGTTCCTGC GCAAGCGCGC GATGGATCAG
GGGCTGCGCA TCGTCGACGT CGCCCGTCAA CTGCACGACG CGTCATCCCA ATCTTGA
|
|---|
| Protein sequence | MSTPVPPPRL RVLLVTDTDK PIGELGDALA RLGYEMLNDV ATPARLPAAV EEQRPDVVII
DTDSPSRDTL EQLAVMHATA PRPVLMFSHD ADQDLIHAAV GAGVSAYLVE GLSAERLAPI
LEVALARFSH DDALRRRLAD VERELAERKL IDRAKRLLMD QRKLSEHDAY AFLRKRAMDQ
GLRIVDVARQ LHDASSQS
|
|---|
| |