More than 300 homologs were found in PanDaTox collection
for query gene Xcel_1506 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  100 
 
 
220 aa  429  1e-119  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  90.53 
 
 
226 aa  343  1e-93  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  90.67 
 
 
227 aa  342  4e-93  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  87.7 
 
 
229 aa  332  3e-90  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  84.66 
 
 
220 aa  317  9e-86  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  80.85 
 
 
215 aa  308  4e-83  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  72.59 
 
 
201 aa  293  2e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  72.08 
 
 
201 aa  288  4e-77  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  73.74 
 
 
229 aa  286  2e-76  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  70.43 
 
 
207 aa  268  5e-71  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  72.83 
 
 
214 aa  267  1e-70  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  66.49 
 
 
212 aa  263  1e-69  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  67.91 
 
 
204 aa  260  1e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  65.78 
 
 
205 aa  253  1.0000000000000001e-66  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  68.53 
 
 
198 aa  253  2.0000000000000002e-66  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  66.31 
 
 
200 aa  250  1e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  61.62 
 
 
210 aa  250  1e-65  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  66.85 
 
 
210 aa  250  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  61.62 
 
 
210 aa  250  1e-65  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  61.62 
 
 
210 aa  250  1e-65  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  65.05 
 
 
213 aa  249  2e-65  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  63.98 
 
 
229 aa  247  9e-65  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  62.77 
 
 
206 aa  246  1e-64  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  63.73 
 
 
199 aa  247  1e-64  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  64.32 
 
 
197 aa  246  1e-64  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  69.19 
 
 
207 aa  245  3e-64  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  62.77 
 
 
206 aa  245  4e-64  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  65.57 
 
 
199 aa  245  4.9999999999999997e-64  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_013595  Sros_2955  response regulator  63.83 
 
 
199 aa  243  1.9999999999999999e-63  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  66.67 
 
 
247 aa  241  7e-63  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  63.04 
 
 
194 aa  239  2e-62  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  63.44 
 
 
189 aa  238  4e-62  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  60.64 
 
 
206 aa  236  2e-61  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  60.54 
 
 
207 aa  232  3e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  63.24 
 
 
205 aa  232  4.0000000000000004e-60  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  57.92 
 
 
200 aa  220  9.999999999999999e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  53.85 
 
 
197 aa  211  7.999999999999999e-54  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  54.95 
 
 
191 aa  208  6e-53  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  56.59 
 
 
195 aa  206  2e-52  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  53.3 
 
 
194 aa  206  2e-52  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  53.3 
 
 
194 aa  202  3e-51  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  50 
 
 
261 aa  191  8e-48  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  50 
 
 
249 aa  189  2.9999999999999997e-47  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  43.72 
 
 
188 aa  165  5e-40  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  44.81 
 
 
194 aa  164  6.9999999999999995e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
202 aa  164  1.0000000000000001e-39  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_002939  GSU2822  response regulator  43.17 
 
 
191 aa  163  2.0000000000000002e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  40.44 
 
 
196 aa  162  2.0000000000000002e-39  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  40.54 
 
 
196 aa  163  2.0000000000000002e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  45.79 
 
 
203 aa  162  3e-39  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  41.85 
 
 
192 aa  160  1e-38  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  43.17 
 
 
194 aa  158  6e-38  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  45.65 
 
 
221 aa  157  9e-38  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  43.96 
 
 
194 aa  157  2e-37  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  40.74 
 
 
205 aa  154  1e-36  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  45.41 
 
 
218 aa  152  5.9999999999999996e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_007498  Pcar_2091  response regulator  43.17 
 
 
187 aa  148  7e-35  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  38.71 
 
 
242 aa  143  2e-33  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  37.7 
 
 
198 aa  142  4e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  40.66 
 
 
220 aa  142  4e-33  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  36.96 
 
 
191 aa  142  5e-33  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  35.52 
 
 
195 aa  138  7.999999999999999e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  37.36 
 
 
194 aa  137  1e-31  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  38.46 
 
 
192 aa  134  9.999999999999999e-31  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  40.11 
 
 
198 aa  134  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  36.84 
 
 
208 aa  127  1.0000000000000001e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  40.54 
 
 
243 aa  125  5e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  38.69 
 
 
198 aa  113  3e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  43.61 
 
 
159 aa  112  6e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  31.52 
 
 
190 aa  110  1.0000000000000001e-23  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  32.42 
 
 
191 aa  109  3e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  31.38 
 
 
191 aa  102  5e-21  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  38.98 
 
 
704 aa  101  9e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  34.78 
 
 
207 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  34.24 
 
 
195 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  34.57 
 
 
191 aa  99.4  4e-20  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_013522  Taci_1321  response regulator receiver protein  45.3 
 
 
120 aa  97.8  1e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_07590  response regulator receiver protein  45.61 
 
 
122 aa  97.1  2e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000535524  n/a   
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  38.71 
 
 
636 aa  97.1  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  31.18 
 
 
196 aa  96.7  2e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1132  response regulator receiver/ANTAR domain-containing protein  33.13 
 
 
194 aa  96.7  3e-19  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.169793  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  37.19 
 
 
352 aa  95.9  4e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009253  Dred_2382  response regulator receiver protein  40.83 
 
 
122 aa  95.5  5e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  33.33 
 
 
191 aa  95.5  5e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  36.59 
 
 
461 aa  95.5  6e-19  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  41.67 
 
 
123 aa  94.7  9e-19  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  30.77 
 
 
194 aa  94.7  1e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  32.61 
 
 
196 aa  94.7  1e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1439  response regulator receiver domain-containing protein  41.59 
 
 
120 aa  93.2  3e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_012034  Athe_2159  response regulator receiver protein  40.87 
 
 
120 aa  92.8  4e-18  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00200925  n/a   
 
 
-
 
NC_008346  Swol_0863  response regulator receiver protein  41.88 
 
 
120 aa  92.4  5e-18  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  33.52 
 
 
210 aa  92.4  5e-18  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  41.53 
 
 
455 aa  92  6e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  28.31 
 
 
195 aa  92  6e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1738  response regulator receiver protein  40 
 
 
122 aa  92  6e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  36.67 
 
 
316 aa  92  7e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  35.33 
 
 
359 aa  91.7  8e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  28.57 
 
 
212 aa  91.7  8e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  28.65 
 
 
224 aa  91.7  8e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_012034  Athe_1771  response regulator receiver protein  38.94 
 
 
117 aa  91.7  8e-18  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
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