| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_12950 |
|---|
| Symbol | |
|---|
| ID | 8372803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 1336192 |
|---|
| End bp | 1336761 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644991572 |
|---|
| Product | response regulator with putative antiterminator output domain |
|---|
| Protein accession | YP_003149091 |
|---|
| Protein GI | 256825131 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.22629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.269406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCG TCGTGGCCGA GGACGAGGCG GTCATCCGCC TGGACCTGGT GGAGATCCTC
ACCGAGCTGG GCCACGAGGT GGTCGCCCAG GTGGGGGACG GGCGTGCCGC TGTGCAGGCC
GCGTGCGAGC ACCGGCCCGA TCTCGCGGTG ATGGACGTGA AGATGCCCGT CCTGGACGGG
ATCACTGCCG CCGAGGAGCT CGCACGCGAG GCCGTGTGCC CGGTGGTGCT GCTCACGGCC
TTCTCCGATG CGGACCTCGT GTCCCGGGCT GCCGAGGCCG GAGTGCTCGC CTATGTCACC
AAGCCGTTCG GACCGAGCGA CCTCGCCCCG GCCCTGGCGG TGGCGAGGGC CCGCTTCGAG
CAGGTCCGGG CCCTGGAGTC CGAGGTGGCC GACCTCACCG AGCGCTTCGA GGCCCGCAAG
GACGTGGACC GCGCCAAGGG GCTGCTGCAG AAGCAGCTGG GGATCGACGA GACGCAGGCC
TTCCGGTGGC TCCAGAAGAC GGCGATGGAC CGCCGGTTGT CGATGCGGGA GGTCGCCCGC
GCCGTCGTCG AGCAGATGGG TCGGGGCTGA
|
|---|
| Protein sequence | MRIVVAEDEA VIRLDLVEIL TELGHEVVAQ VGDGRAAVQA ACEHRPDLAV MDVKMPVLDG
ITAAEELARE AVCPVVLLTA FSDADLVSRA AEAGVLAYVT KPFGPSDLAP ALAVARARFE
QVRALESEVA DLTERFEARK DVDRAKGLLQ KQLGIDETQA FRWLQKTAMD RRLSMREVAR
AVVEQMGRG
|
|---|
| |