More than 300 homologs were found in PanDaTox collection
for query gene BLD_0739 on replicon NC_010816
Organism: Bifidobacterium longum DJO10A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010816  BLD_0739  putative response regulator  100 
 
 
261 aa  525  1e-148  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  81.3 
 
 
249 aa  377  1e-104  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  49.76 
 
 
200 aa  206  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  48.39 
 
 
210 aa  202  4e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  48.39 
 
 
210 aa  202  4e-51  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  48.39 
 
 
210 aa  202  6e-51  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  48.58 
 
 
205 aa  199  3.9999999999999996e-50  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  47.51 
 
 
199 aa  199  3.9999999999999996e-50  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  48.83 
 
 
198 aa  199  3.9999999999999996e-50  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  47.47 
 
 
213 aa  197  1.0000000000000001e-49  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  48.29 
 
 
197 aa  197  2.0000000000000003e-49  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  46.69 
 
 
229 aa  196  3e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  47 
 
 
199 aa  196  4.0000000000000005e-49  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  50 
 
 
227 aa  196  5.000000000000001e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  46.79 
 
 
229 aa  194  1e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  48.56 
 
 
204 aa  194  1e-48  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  48.8 
 
 
226 aa  192  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  47.69 
 
 
215 aa  191  9e-48  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  48.31 
 
 
207 aa  191  1e-47  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  50 
 
 
220 aa  191  1e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  47 
 
 
199 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  45.7 
 
 
207 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  48.56 
 
 
220 aa  189  2.9999999999999997e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  47.85 
 
 
229 aa  188  5.999999999999999e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  48.06 
 
 
194 aa  188  1e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  48.51 
 
 
206 aa  187  2e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  46.83 
 
 
214 aa  186  4e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  45.15 
 
 
212 aa  184  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  47.06 
 
 
201 aa  184  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  46.23 
 
 
201 aa  184  2.0000000000000003e-45  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  46.77 
 
 
247 aa  183  2.0000000000000003e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  46.57 
 
 
206 aa  183  3e-45  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  45.59 
 
 
206 aa  182  4.0000000000000006e-45  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  48.51 
 
 
205 aa  179  2.9999999999999997e-44  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  46.08 
 
 
197 aa  179  2.9999999999999997e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  44.04 
 
 
210 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  44.66 
 
 
189 aa  171  1e-41  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  43.9 
 
 
200 aa  171  1e-41  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  47.57 
 
 
207 aa  169  3e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  42.08 
 
 
194 aa  169  4e-41  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  44.02 
 
 
191 aa  169  5e-41  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  41.09 
 
 
194 aa  165  5e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  41.26 
 
 
195 aa  161  9e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  41.67 
 
 
221 aa  154  1e-36  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  39.44 
 
 
203 aa  146  4.0000000000000006e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  35.58 
 
 
191 aa  138  7e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  37.13 
 
 
196 aa  136  4e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  34.93 
 
 
242 aa  135  9e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  36.14 
 
 
196 aa  134  9.999999999999999e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  37.62 
 
 
194 aa  134  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  35.64 
 
 
198 aa  132  3.9999999999999996e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  35.61 
 
 
192 aa  132  3.9999999999999996e-30  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  37.25 
 
 
194 aa  132  5e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  37.32 
 
 
218 aa  127  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  35.78 
 
 
205 aa  125  5e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  33.17 
 
 
194 aa  125  8.000000000000001e-28  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  36.76 
 
 
188 aa  124  1e-27  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  33 
 
 
198 aa  120  1.9999999999999998e-26  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  34.91 
 
 
220 aa  120  1.9999999999999998e-26  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_002939  GSU2822  response regulator  34.8 
 
 
191 aa  119  6e-26  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  34.8 
 
 
202 aa  118  9.999999999999999e-26  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  32.2 
 
 
192 aa  114  2.0000000000000002e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  28.77 
 
 
208 aa  114  2.0000000000000002e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  42.14 
 
 
159 aa  114  2.0000000000000002e-24  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  31.86 
 
 
187 aa  113  4.0000000000000004e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  31.53 
 
 
194 aa  111  9e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  30.69 
 
 
195 aa  110  2.0000000000000002e-23  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  32.86 
 
 
243 aa  107  3e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  42.5 
 
 
123 aa  99  6e-20  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  32.21 
 
 
198 aa  98.6  8e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_007952  Bxe_B1048  response regulator receiver/ANTAR domain-containing protein  31.87 
 
 
191 aa  97.8  2e-19  Burkholderia xenovorans LB400  Bacteria  normal  0.192908  normal  0.77765 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  30.77 
 
 
191 aa  95.9  6e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  33.99 
 
 
191 aa  95.5  9e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  41.22 
 
 
636 aa  94.4  2e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  27.32 
 
 
190 aa  94  2e-18  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_3445  response regulator receiver/ANTAR domain-containing protein  31.02 
 
 
191 aa  94  2e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  35.4 
 
 
352 aa  93.2  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  36.13 
 
 
336 aa  93.2  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  37.59 
 
 
603 aa  92.8  5e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  28.16 
 
 
195 aa  92.8  5e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  30.39 
 
 
191 aa  92.8  5e-18  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_009075  BURPS668_A1759  response regulator/ANTAR domain-containing protein  30.27 
 
 
198 aa  90.9  2e-17  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  30.24 
 
 
191 aa  90.5  2e-17  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_006349  BMAA1090  response regulator NasT  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0864919  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0246  response regulator NasT  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0087  response regulator/ANTAR domain-containing protein  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia mallei SAVP1  Bacteria  normal  0.792302  n/a   
 
 
-
 
NC_008835  BMA10229_0333  response regulator NasT  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  0.169956  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1670  response regulator/ANTAR domain-containing protein  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1255  response regulator/ANTAR domain-containing protein  30.27 
 
 
198 aa  90.5  3e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0422038  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  32.2 
 
 
191 aa  89.7  4e-17  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  39.29 
 
 
122 aa  89.7  4e-17  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_007644  Moth_0803  response regulator receiver domain-containing protein  39.17 
 
 
120 aa  89  6e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_1439  response regulator receiver domain-containing protein  40.74 
 
 
120 aa  89  7e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  37.61 
 
 
450 aa  89  8e-17  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  31.95 
 
 
198 aa  89  8e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_012793  GWCH70_1248  response regulator receiver protein  38.39 
 
 
118 aa  88.2  1e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  31.95 
 
 
198 aa  88.6  1e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  32.93 
 
 
359 aa  87.4  2e-16  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  30 
 
 
386 aa  86.7  3e-16  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007650  BTH_II1167  response regulator NasT  29.73 
 
 
198 aa  87  3e-16  Burkholderia thailandensis E264  Bacteria  normal  0.136185  n/a   
 
 
-
 
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