Gene Dred_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1289 
Symbol 
ID4957264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1381401 
End bp1382066 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content45% 
IMG OID640180468 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001112648 
Protein GI134299152 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.132207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA AACCTAATAA TTTTAAAATA ATTACTTTTC CTACAGATTT ATATAGGAAA 
CAACAGGAAA AGTACCGTGA GCATAGCGGG GAGGAAGAGA GGTTGCGGGT GGTACTGGCG
GAAGACGAGC CTATTATCCG TATGGATATC CGGCGGATGC TAGAGGACAT GGGGCACCAA
GTGGTGGGAG AATGTCGGGA TGGGGACGAG GCTATACGGT TAACCAAAGA ATACCGTCCA
GATGTGGTCC TTATGGATAT CAAGATGCCC AGGATGGAAG GATTAGCGGC TACCCAGGTA
ATTTTTGAAA AAATGATGGC CCCGGTGGTG CTGTTAACAT CCTTTAGTGA TGCTGAGACA
GTGCAGGAGG CCATGGACAG CGGTGCCTTT GGCTACTTGG TTAAGCCAGT CGATGGAAAA
AGGCTGCGTA CAACCTTAAA AGTTGCCCGC CAGCGTTTTG TAGAAATGAG AAAGCTAAGA
ACAGAGGTAG ACAGGCTGTC GGAAGCGAAT GAAGATCGAA TTATTATCTC CCGGAGCAAA
CTCCTACTGC AAAAAAAGCT TGGTTGTACT GAGGATGAAG CCTTCAAAAT TATTCGCAAA
ACAAGCATGA ATCGACATTG TCGTATGGGT GAAGTGGCCA GAGAAATCCT AAGAAAAAAT
ATCTAA
 
Protein sequence
MANKPNNFKI ITFPTDLYRK QQEKYREHSG EEERLRVVLA EDEPIIRMDI RRMLEDMGHQ 
VVGECRDGDE AIRLTKEYRP DVVLMDIKMP RMEGLAATQV IFEKMMAPVV LLTSFSDAET
VQEAMDSGAF GYLVKPVDGK RLRTTLKVAR QRFVEMRKLR TEVDRLSEAN EDRIIISRSK
LLLQKKLGCT EDEAFKIIRK TSMNRHCRMG EVAREILRKN I