More than 300 homologs were found in PanDaTox collection
for query gene Ndas_3159 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  100 
 
 
212 aa  421  1e-117  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  83.9 
 
 
207 aa  348  3e-95  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  75.26 
 
 
214 aa  291  5e-78  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  74.74 
 
 
199 aa  290  1e-77  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  75.27 
 
 
197 aa  290  1e-77  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  72.49 
 
 
206 aa  283  2.0000000000000002e-75  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  71.43 
 
 
206 aa  276  1e-73  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  69.68 
 
 
204 aa  274  6e-73  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  69.89 
 
 
205 aa  274  8e-73  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  69.15 
 
 
210 aa  272  3e-72  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  69.15 
 
 
210 aa  272  3e-72  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  69.15 
 
 
210 aa  272  3e-72  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  69.68 
 
 
213 aa  271  5.000000000000001e-72  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  70.43 
 
 
220 aa  271  6e-72  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  69.15 
 
 
229 aa  271  8.000000000000001e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  70.05 
 
 
199 aa  270  1e-71  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  68.09 
 
 
229 aa  268  4e-71  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  70.88 
 
 
210 aa  268  5.9999999999999995e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  69.31 
 
 
229 aa  267  8.999999999999999e-71  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  67.89 
 
 
226 aa  267  1e-70  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  67.02 
 
 
227 aa  267  1e-70  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  69.95 
 
 
207 aa  266  2e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  69.35 
 
 
200 aa  264  7e-70  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  66.49 
 
 
220 aa  263  1e-69  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  65.97 
 
 
199 aa  263  1e-69  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  66.67 
 
 
201 aa  263  2e-69  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  64.92 
 
 
201 aa  262  3e-69  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  69.4 
 
 
200 aa  260  1e-68  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  68.89 
 
 
247 aa  256  2e-67  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  69.02 
 
 
205 aa  256  3e-67  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  73.63 
 
 
207 aa  252  4.0000000000000004e-66  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  63.49 
 
 
206 aa  251  5.000000000000001e-66  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  63.83 
 
 
194 aa  250  1e-65  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  63.1 
 
 
215 aa  248  6e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  63.49 
 
 
198 aa  242  3e-63  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  55.49 
 
 
197 aa  217  1e-55  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  56.45 
 
 
189 aa  217  1e-55  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  56.45 
 
 
194 aa  216  2.9999999999999998e-55  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  56.52 
 
 
191 aa  213  9.999999999999999e-55  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  56.45 
 
 
194 aa  212  3.9999999999999995e-54  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  55.98 
 
 
195 aa  209  2e-53  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  46.04 
 
 
249 aa  184  6e-46  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  45.15 
 
 
261 aa  184  1.0000000000000001e-45  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  51.05 
 
 
203 aa  182  5.0000000000000004e-45  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  46.49 
 
 
194 aa  168  4e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  45.11 
 
 
196 aa  167  9e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  45.11 
 
 
196 aa  167  2e-40  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  43.16 
 
 
194 aa  166  2e-40  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  46.99 
 
 
194 aa  164  9e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_002939  GSU2822  response regulator  44.81 
 
 
191 aa  164  1.0000000000000001e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  42.7 
 
 
242 aa  164  1.0000000000000001e-39  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  45.05 
 
 
221 aa  160  1e-38  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  43.17 
 
 
202 aa  159  4e-38  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  42.62 
 
 
188 aa  158  7e-38  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  43.41 
 
 
220 aa  157  9e-38  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_008261  CPF_0888  response regulator  39.56 
 
 
191 aa  157  1e-37  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  41.18 
 
 
198 aa  157  1e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  42.47 
 
 
194 aa  155  6e-37  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  42.39 
 
 
192 aa  154  7e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  40.44 
 
 
195 aa  152  2.9999999999999998e-36  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  44.62 
 
 
218 aa  152  5e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  39.34 
 
 
192 aa  152  5e-36  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
208 aa  145  5e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_007498  Pcar_2091  response regulator  40.22 
 
 
187 aa  144  1e-33  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  38.8 
 
 
205 aa  144  1e-33  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  42.93 
 
 
198 aa  141  6e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  39.57 
 
 
243 aa  134  9.999999999999999e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  37.1 
 
 
191 aa  124  1e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  34.41 
 
 
190 aa  124  1e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  41.94 
 
 
198 aa  123  2e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  42.96 
 
 
159 aa  117  9.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  34.95 
 
 
191 aa  115  3e-25  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  34.62 
 
 
191 aa  105  4e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  47.46 
 
 
636 aa  105  7e-22  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_012034  Athe_0569  response regulator receiver and ANTAR domain protein  34.5 
 
 
194 aa  100  1e-20  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000937079  n/a   
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.26 
 
 
191 aa  100  2e-20  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  28.65 
 
 
195 aa  96.3  3e-19  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  31.98 
 
 
224 aa  96.3  3e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  35.03 
 
 
197 aa  95.9  4e-19  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  40.16 
 
 
704 aa  95.1  6e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  40.83 
 
 
316 aa  94.7  9e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  39.34 
 
 
352 aa  94.4  1e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011899  Hore_10620  response regulator receiver protein  44.66 
 
 
122 aa  94  2e-18  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00212992  n/a   
 
 
-
 
NC_014211  Ndas_4872  two component transcriptional regulator, LuxR family  45.76 
 
 
232 aa  94  2e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.247388  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  47.86 
 
 
225 aa  93.2  3e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  38.97 
 
 
355 aa  92.8  3e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_012034  Athe_1771  response regulator receiver protein  40.71 
 
 
117 aa  92.4  4e-18  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  40.83 
 
 
461 aa  92.8  4e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_010424  Daud_1738  response regulator receiver protein  40.71 
 
 
122 aa  92.8  4e-18  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0531  response regulator receiver protein  43.1 
 
 
120 aa  92.4  4e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  32.6 
 
 
196 aa  92.4  5e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  41.74 
 
 
380 aa  92.4  5e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  35.4 
 
 
450 aa  92  5e-18  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  38.35 
 
 
359 aa  91.7  7e-18  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2382  response regulator receiver protein  39.83 
 
 
122 aa  92  7e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  29.19 
 
 
194 aa  91.7  8e-18  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.03 
 
 
221 aa  91.3  9e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  44.8 
 
 
231 aa  90.5  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  32.04 
 
 
207 aa  90.1  2e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  39.5 
 
 
426 aa  90.1  2e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
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