| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2864 |
|---|
| Symbol | |
|---|
| ID | 4958530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3109367 |
|---|
| End bp | 3109942 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640182045 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_001114193 |
|---|
| Protein GI | 134300697 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000561884 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAA GGCTTGTGAT AGCTAGCGGT GATAAAGCAG AATTATCTCA GTTAAGGCAA
ATGCTGACAC GCTTGGGTTA CCCTGTGGTG GCAGAGGCAA CAAGCGGTAT GAATGCGCTG
AAAGCTATAC GATCCACAAT GCCGGAAGTT GTTTTACTGG ATGATTACCT GCCTGCCCTG
GATGGTATGC AGGTAGCGAA AATCATAACC GAAGAGAATT TAGCTCCTGT GGTTTTGATG
GTTTCCCAGG GCAATAAGGC CCTGGTGGAA AGGGCCAGGG ATGTAATCTC TGCTTTTTTA
ATGCGACCCT ATCTGGAGGA CCAGGTTTAC GCAGCGGTTG AAGCAGCGGC ATCCTCTCAT
AAGCGTTTTC TCCAATTGCA ACAACAACTT AACGAATTGC AAAATACTTT AAAGGCTAGA
AAAGTTGTCG AAAAGGCCAA GGGTATTCTG ATGAAGCAAA GGGGTTTTAC CGAGGAACAA
GCCCATAAAG CCATTCAGCA GGCTGCCATG AAGAAGAGAA CAAACATAAA AGCGGTGGCC
GAAGCAATTA TAACAGCCAA TGAAATGGGT ATTTAA
|
|---|
| Protein sequence | MDRRLVIASG DKAELSQLRQ MLTRLGYPVV AEATSGMNAL KAIRSTMPEV VLLDDYLPAL
DGMQVAKIIT EENLAPVVLM VSQGNKALVE RARDVISAFL MRPYLEDQVY AAVEAAASSH
KRFLQLQQQL NELQNTLKAR KVVEKAKGIL MKQRGFTEEQ AHKAIQQAAM KKRTNIKAVA
EAIITANEMG I
|
|---|
| |