| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0739 |
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| Symbol | amiR |
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| ID | 6362820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 848297 |
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| End bp | 849082 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679903 |
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| Product | putative response regulator |
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| Protein accession | YP_001954683 |
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| Protein GI | 189439602 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000540248 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGCAA GGAAGAAGTC CGAAGAACCG AGTATCAACA TCGATGAGGT GCTGACCGAC
GAAGAGCTCA AGGCCGTGGC CAATGAAAGC GAACCTGCTG AGCGCAAGGC CAAGCCCGAG
GACGGTCCGC GTACCGTTGT CGTGGCCGAG GATGAAGCCG TGAACCGCAT GGATCTGGTC
GCCATGCTGG AAGACAACGG TTATGAGGTC GTTGGTCAGG CCGCCAACGG CGAGGAAGCC
GTGGAACTGA CCCGCAAGTA CCGCCCTGAT GTGGTGTGCA TGGATGTCAA GATGCCGCGT
ATGGACGGCA TCACCGCTGC CGGCATTATC TGCGATGAAA ACATCGCCCC CGTCGTCATG
CTCACCGCAT TCTCCCAGAC CGATCTGGTG AAGAAGGCCA CCGGCGCTGG CGCCATGGCA
TACGTCACCA AGCCGTACGA GGAATCCAAG CTGCTGCCGA CCCTCGAGGT GGCCATGGGC
CGTTTCGCCG AGATCAACGA TTTGCTGGAC AGCGTGGAGC GCAGCGAACG TAAGCTCAAG
GAAACCACCG ATCAGCTCAA GGAAACCGAA GAGAAGCTCA AGAAGGCCGA AGACACGCTT
GAGGAGCGCA AGCTCGTCGA CCGCGCCAAG GGTCTGCTGA TGGACAAGGC GGACTTCTCC
GAGCAGGGTG CCTTCCGTTG GATTCAGAAG ACCTCCATGG ACCAGCGCAT CCCCAAGAAG
CGCCTGGCTC AGGCCATCAT CGCCAAGTAC GGCGATCCGA AGCCTTCTGA TTCGGGCGAA
CGCTGA
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| Protein sequence | MAARKKSEEP SINIDEVLTD EELKAVANES EPAERKAKPE DGPRTVVVAE DEAVNRMDLV
AMLEDNGYEV VGQAANGEEA VELTRKYRPD VVCMDVKMPR MDGITAAGII CDENIAPVVM
LTAFSQTDLV KKATGAGAMA YVTKPYEESK LLPTLEVAMG RFAEINDLLD SVERSERKLK
ETTDQLKETE EKLKKAEDTL EERKLVDRAK GLLMDKADFS EQGAFRWIQK TSMDQRIPKK
RLAQAIIAKY GDPKPSDSGE R
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