Gene Sare_3378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3378 
Symbol 
ID5703412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3902674 
End bp3903294 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID641272804 
Productresponse regulator receiver/ANTAR domain-containing protein 
Protein accessionYP_001538171 
Protein GI159038918 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0248143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAGA CGCAGACGGA CGCCGAGCGC AGGCGGGTAC TGATCGCCGA GGACGAGGCG 
CTCATCCGGC TGGATCTCGC CGAGATGCTC GTCGAGGAAG GCTACGAGGT CGTCGGAGAG
GCCGGTGACG GGGAGACGGC CGTGCGGCTT GCCAACGAGT TGAAGCCGGA CCTGGTCATC
CTCGACATCA AGATGCCGAT CATGGATGGC CTGGCCGCCG CCGAGCGGAT CGCTGGCGAG
CGGATCGCTC CGGTCATCAT TCTGACCGCG TTCAGCCAGC GAGACCTGGT GGAGCGGGCA
CGGGCAGCCG GCGCGATGGC GTACCTGGTC AAGCCCTTCC AGAAGAGCGA CCTCGTCCCG
GCGATGGAGA TCGCGTTGTC GCGCTACTCC GAGATCGCCG TCCTGGAGGC GGAGGTCGCT
GGCCTCACCG ACCGGCTAGA GGTACGCAAG ACCGTCGAGC GCGCCAAGGG CGCGCTGATG
ACGACGTACG GGATGACCGA GCCGCAGGCC TTCAAGTGGA TCCAGCGCAC CGCGATGGAT
CACCGGATGA CCATGAAAGA GGTCGCCGAG CGGATCCTCC AGGAAACCGC TGGGGGCGAG
GTGACCCGCC CGGCCCCGTA G
 
Protein sequence
MAETQTDAER RRVLIAEDEA LIRLDLAEML VEEGYEVVGE AGDGETAVRL ANELKPDLVI 
LDIKMPIMDG LAAAERIAGE RIAPVIILTA FSQRDLVERA RAAGAMAYLV KPFQKSDLVP
AMEIALSRYS EIAVLEAEVA GLTDRLEVRK TVERAKGALM TTYGMTEPQA FKWIQRTAMD
HRMTMKEVAE RILQETAGGE VTRPAP