Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3378 |
Symbol | |
ID | 5703412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3902674 |
End bp | 3903294 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641272804 |
Product | response regulator receiver/ANTAR domain-containing protein |
Protein accession | YP_001538171 |
Protein GI | 159038918 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0248143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGA CGCAGACGGA CGCCGAGCGC AGGCGGGTAC TGATCGCCGA GGACGAGGCG CTCATCCGGC TGGATCTCGC CGAGATGCTC GTCGAGGAAG GCTACGAGGT CGTCGGAGAG GCCGGTGACG GGGAGACGGC CGTGCGGCTT GCCAACGAGT TGAAGCCGGA CCTGGTCATC CTCGACATCA AGATGCCGAT CATGGATGGC CTGGCCGCCG CCGAGCGGAT CGCTGGCGAG CGGATCGCTC CGGTCATCAT TCTGACCGCG TTCAGCCAGC GAGACCTGGT GGAGCGGGCA CGGGCAGCCG GCGCGATGGC GTACCTGGTC AAGCCCTTCC AGAAGAGCGA CCTCGTCCCG GCGATGGAGA TCGCGTTGTC GCGCTACTCC GAGATCGCCG TCCTGGAGGC GGAGGTCGCT GGCCTCACCG ACCGGCTAGA GGTACGCAAG ACCGTCGAGC GCGCCAAGGG CGCGCTGATG ACGACGTACG GGATGACCGA GCCGCAGGCC TTCAAGTGGA TCCAGCGCAC CGCGATGGAT CACCGGATGA CCATGAAAGA GGTCGCCGAG CGGATCCTCC AGGAAACCGC TGGGGGCGAG GTGACCCGCC CGGCCCCGTA G
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Protein sequence | MAETQTDAER RRVLIAEDEA LIRLDLAEML VEEGYEVVGE AGDGETAVRL ANELKPDLVI LDIKMPIMDG LAAAERIAGE RIAPVIILTA FSQRDLVERA RAAGAMAYLV KPFQKSDLVP AMEIALSRYS EIAVLEAEVA GLTDRLEVRK TVERAKGALM TTYGMTEPQA FKWIQRTAMD HRMTMKEVAE RILQETAGGE VTRPAP
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