More than 300 homologs were found in PanDaTox collection
for query gene Ksed_12950 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_12950  response regulator with putative antiterminator output domain  100 
 
 
189 aa  369  1e-101  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.22629  normal  0.269406 
 
 
-
 
NC_014151  Cfla_1977  response regulator receiver and ANTAR domain protein  64.52 
 
 
227 aa  243  1.9999999999999999e-63  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.239234  normal 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  63.3 
 
 
220 aa  240  9e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  62.9 
 
 
229 aa  240  1e-62  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_013530  Xcel_1506  response regulator receiver and ANTAR domain protein  63.44 
 
 
220 aa  238  2.9999999999999997e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  62.37 
 
 
229 aa  237  9e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_013172  Bfae_14950  response regulator with putative antiterminator output domain  63.04 
 
 
215 aa  236  1e-61  Brachybacterium faecium DSM 4810  Bacteria  normal  0.117628  n/a   
 
 
-
 
NC_013521  Sked_20250  response regulator with putative antiterminator output domain  61.83 
 
 
226 aa  234  4e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0947543 
 
 
-
 
NC_012803  Mlut_11030  response regulator with putative antiterminator output domain  62.57 
 
 
198 aa  234  5.0000000000000005e-61  Micrococcus luteus NCTC 2665  Bacteria  normal  0.241703  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  59.68 
 
 
207 aa  228  3e-59  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  63.19 
 
 
214 aa  228  4e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  56.99 
 
 
201 aa  225  4e-58  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  56.45 
 
 
201 aa  224  6e-58  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_013595  Sros_2955  response regulator  58.47 
 
 
199 aa  217  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5687  response regulator receiver and ANTAR domain protein  59.34 
 
 
210 aa  217  8.999999999999998e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3159  response regulator receiver and ANTAR domain protein  56.45 
 
 
212 aa  217  1e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  56.15 
 
 
204 aa  215  2.9999999999999998e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  52.66 
 
 
206 aa  211  4.9999999999999996e-54  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  55.38 
 
 
205 aa  210  7.999999999999999e-54  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  57.53 
 
 
200 aa  208  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  53.19 
 
 
206 aa  208  3e-53  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  54.55 
 
 
197 aa  207  6e-53  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  54.05 
 
 
210 aa  206  2e-52  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  54.05 
 
 
210 aa  206  2e-52  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3018  response regulator receiver  60.99 
 
 
207 aa  206  2e-52  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  54.05 
 
 
210 aa  206  2e-52  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  57.38 
 
 
194 aa  205  4e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  54.35 
 
 
207 aa  203  1e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  54.59 
 
 
213 aa  203  1e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  53.51 
 
 
229 aa  201  8e-51  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  54.4 
 
 
199 aa  200  9.999999999999999e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_007777  Francci3_1618  response regulator receiver/ANTAR domain-containing protein  53.85 
 
 
199 aa  199  1.9999999999999998e-50  Frankia sp. CcI3  Bacteria  normal  0.144201  normal  0.292856 
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  55.19 
 
 
205 aa  199  1.9999999999999998e-50  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  51.09 
 
 
200 aa  195  4.0000000000000005e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  53.3 
 
 
195 aa  194  6e-49  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  54.44 
 
 
247 aa  194  7e-49  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2893  response regulator receiver  47.85 
 
 
206 aa  190  1e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  0.723289  n/a   
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  46.99 
 
 
197 aa  189  2e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  48.63 
 
 
194 aa  188  5e-47  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  49.45 
 
 
191 aa  186  2e-46  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  48.63 
 
 
194 aa  184  9e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013721  HMPREF0424_0616  response regulator receiver domain protein  45.05 
 
 
249 aa  173  1.9999999999999998e-42  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_010816  BLD_0739  putative response regulator  44.66 
 
 
261 aa  171  5.999999999999999e-42  Bifidobacterium longum DJO10A  Bacteria  hitchhiker  0.000540248  n/a   
 
 
-
 
NC_002939  GSU2822  response regulator  44.75 
 
 
191 aa  160  1e-38  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  42.7 
 
 
221 aa  159  2e-38  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  43.65 
 
 
188 aa  159  2e-38  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  43.65 
 
 
202 aa  155  3e-37  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_013124  Afer_1081  response regulator receiver and ANTAR domain protein  46.32 
 
 
203 aa  154  6e-37  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  41.3 
 
 
194 aa  148  4e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_008609  Ppro_3459  response regulator receiver/ANTAR domain-containing protein  40.98 
 
 
205 aa  147  6e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  37.7 
 
 
196 aa  144  9e-34  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3118  response regulator receiver/ANTAR domain-containing protein  39.34 
 
 
196 aa  144  1e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2517  response regulator receiver and ANTAR domain protein  40.66 
 
 
194 aa  141  7e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4357  response regulator receiver/ANTAR domain-containing protein  39.67 
 
 
198 aa  140  9.999999999999999e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.480943  n/a   
 
 
-
 
NC_013739  Cwoe_5028  response regulator receiver and ANTAR domain protein  42.47 
 
 
198 aa  138  4.999999999999999e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.181706  normal  0.0113639 
 
 
-
 
NC_008261  CPF_0888  response regulator  35.16 
 
 
191 aa  133  9.999999999999999e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0084  response regulator receiver and ANTAR domain protein  37.3 
 
 
242 aa  132  1.9999999999999998e-30  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.682854  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  38.12 
 
 
187 aa  130  1.0000000000000001e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3761  response regulator receiver and ANTAR domain protein  35.16 
 
 
194 aa  130  1.0000000000000001e-29  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000015775  normal 
 
 
-
 
NC_010003  Pmob_0297  response regulator receiver/ANTAR domain-containing protein  30.43 
 
 
195 aa  128  5.0000000000000004e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.719259  n/a   
 
 
-
 
NC_013517  Sterm_1051  response regulator receiver and ANTAR domain protein  34.22 
 
 
192 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3764  response regulator receiver and ANTAR domain protein  35.16 
 
 
194 aa  125  2.0000000000000002e-28  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0425638  normal 
 
 
-
 
NC_009253  Dred_2808  response regulator receiver/ANTAR domain-containing protein  33.52 
 
 
220 aa  124  1e-27  Desulfotomaculum reducens MI-1  Bacteria  decreased coverage  0.00041222  n/a   
 
 
-
 
NC_009253  Dred_1293  response regulator receiver protein  42.54 
 
 
159 aa  117  7.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_2394  response regulator receiver and ANTAR domain protein  38.71 
 
 
218 aa  108  5e-23  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00108275  hitchhiker  0.000509226 
 
 
-
 
NC_010424  Daud_2028  response regulator receiver/ANTAR domain-containing protein  31.87 
 
 
192 aa  105  5e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000049817  n/a   
 
 
-
 
NC_013235  Namu_0678  response regulator receiver and ANTAR domain protein  38.38 
 
 
243 aa  104  9e-22  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0588  response regulator NasT  35.12 
 
 
191 aa  101  5e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.419145  n/a   
 
 
-
 
NC_007644  Moth_1295  response regulator receiver/ANTAR domain-containing protein  30.77 
 
 
208 aa  100  1e-20  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.153579  normal  0.0128304 
 
 
-
 
NC_010424  Daud_2031  response regulator receiver/ANTAR domain-containing protein  34.39 
 
 
198 aa  99  3e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  unclonable  0.00000000027462  n/a   
 
 
-
 
NC_009253  Dred_2811  response regulator receiver/ANTAR domain-containing protein  32.62 
 
 
191 aa  95.9  3e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00444481  n/a   
 
 
-
 
NC_007484  Noc_1494  response regulator  30.77 
 
 
194 aa  94.7  6e-19  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.621557  n/a   
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  44.66 
 
 
352 aa  92.8  3e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007520  Tcr_1151  response regulator receiver/ANTAR domain-containing protein  28.96 
 
 
195 aa  92.4  4e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2821  response regulator receiver/ANTAR domain-containing protein  31.14 
 
 
224 aa  92.4  4e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.41961  normal  0.477248 
 
 
-
 
NC_008228  Patl_2529  response regulator receiver/ANTAR domain-containing protein  30.99 
 
 
212 aa  92  4e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2864  Fis family transcriptional regulator  31.38 
 
 
191 aa  91.3  7e-18  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000561884  n/a   
 
 
-
 
NC_008254  Meso_1448  response regulator receiver/ANTAR domain-containing protein  32.2 
 
 
196 aa  91.3  8e-18  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0829  response regulator receiver:ANTAR  34.57 
 
 
191 aa  90.5  1e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.018256 
 
 
-
 
NC_009620  Smed_4528  response regulator receiver/ANTAR domain-containing protein  33.15 
 
 
196 aa  90.5  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0963  response regulator receiver and ANTAR domain protein  30.77 
 
 
191 aa  90.9  1e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000231614  normal 
 
 
-
 
NC_008752  Aave_2149  response regulator receiver/ANTAR domain-containing protein  37.86 
 
 
208 aa  89.7  2e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3275  response regulator receiver/ANTAR domain-containing protein  31.68 
 
 
430 aa  89.4  3e-17  Polaromonas sp. JS666  Bacteria  normal  0.197236  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  41.6 
 
 
636 aa  89  3e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_012850  Rleg_1632  response regulator receiver and ANTAR domain protein  33.15 
 
 
207 aa  89  4e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0623893 
 
 
-
 
NC_011992  Dtpsy_2319  response regulator receiver and ANTAR domain protein  35.15 
 
 
206 aa  88.6  5e-17  Acidovorax ebreus TPSY  Bacteria  normal  0.781459  n/a   
 
 
-
 
NC_011369  Rleg2_1455  response regulator receiver and ANTAR domain protein  32.6 
 
 
195 aa  88.6  5e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.770993 
 
 
-
 
NC_008782  Ajs_2830  response regulator receiver/ANTAR domain-containing protein  35.15 
 
 
206 aa  88.6  5e-17  Acidovorax sp. JS42  Bacteria  normal  normal  0.264074 
 
 
-
 
NC_013385  Adeg_1890  response regulator receiver and ANTAR domain protein  35.12 
 
 
197 aa  87  1e-16  Ammonifex degensii KC4  Bacteria  normal  0.0366782  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  43.94 
 
 
225 aa  87  1e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_010320  Teth514_2177  response regulator receiver/ANTAR domain-containing protein  25 
 
 
190 aa  86.7  2e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3940  response regulator receiver/ANTAR domain-containing protein  34.71 
 
 
198 aa  86.7  2e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.590133  normal 
 
 
-
 
NC_008786  Veis_2589  Fis family transcriptional regulator  37.32 
 
 
208 aa  86.7  2e-16  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0488842 
 
 
-
 
NC_010552  BamMC406_4403  response regulator receiver/ANTAR domain-containing protein  33.89 
 
 
198 aa  85.9  3e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.155669 
 
 
-
 
NC_010676  Bphyt_5673  response regulator receiver and ANTAR domain protein  33.73 
 
 
191 aa  85.5  4e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.598594 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  45.45 
 
 
217 aa  85.1  6e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  38.89 
 
 
667 aa  85.1  6e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A1393  putative response regulator transcription regulator protein  38.57 
 
 
210 aa  85.1  6e-16  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.40238 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.7 
 
 
704 aa  84.7  7e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_003295  RSc0382  response regulator transcription regulator protein  38.41 
 
 
195 aa  84.3  9e-16  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.846144 
 
 
-
 
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