Gene RSc0382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0382 
Symbol 
ID1219185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp411163 
End bp411750 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID637236739 
Productresponse regulator transcription regulator protein 
Protein accessionNP_518503 
Protein GI17545101 
COG category[T] Signal transduction mechanisms 
COG ID[COG3707] Response regulator with putative antiterminator output domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.846144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCA CGCGCGTGCT GCTGGTGCGC GATCCGCTCG ACGCGGAGCA GGTCAACCTG 
GAGCTGATCC GCGCCGGACT GGCCGAGGCC GGCTTCGTGG ACGTGGGCGT GGTCGATGCC
GACCTGATGC TGCCCGAGCG CATCGCCCAG ACCCAGCCGG ACATGGTGAT CGTGGCCTCC
GAATCGGCCG CGCGCGACAC CATCGAGCAC GTCTGCGTGG CCACCCAGCA CGCGCCGCGC
CCCATCGTGC TGTTCACCGA CAACGACGAC GCGAGCCGCA TCAAGGCGGC GTTCGCGGCC
GGCATCACCG CCTATATCGT CGACGGGCTC AAGCCGACCC GCGTGAAGGC GGTGCTGGAT
GTCGCCTACG CGCGGTTCGA GCACGAGCGC GCGCTGCGCG CCGAGCTGGA CAACGCCAAG
ACCCAGCTGG CCGAGCGCAA GGTGCTCGAG CGCGCCAAGG GCCTGCTGAT GCAGCAGATG
CAGCTGTCGG AAGACGAAGC CTTCAAGCGC CTGCGCAAGA TGGCGATGGA CCGCAACATC
AAGCTGGTGG AAGCGGCCCA GCGGGTCATC GACGTCATGG CCGGCTAG
 
Protein sequence
MAPTRVLLVR DPLDAEQVNL ELIRAGLAEA GFVDVGVVDA DLMLPERIAQ TQPDMVIVAS 
ESAARDTIEH VCVATQHAPR PIVLFTDNDD ASRIKAAFAA GITAYIVDGL KPTRVKAVLD
VAYARFEHER ALRAELDNAK TQLAERKVLE RAKGLLMQQM QLSEDEAFKR LRKMAMDRNI
KLVEAAQRVI DVMAG