Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0382 |
Symbol | |
ID | 1219185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 411163 |
End bp | 411750 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637236739 |
Product | response regulator transcription regulator protein |
Protein accession | NP_518503 |
Protein GI | 17545101 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.846144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCCA CGCGCGTGCT GCTGGTGCGC GATCCGCTCG ACGCGGAGCA GGTCAACCTG GAGCTGATCC GCGCCGGACT GGCCGAGGCC GGCTTCGTGG ACGTGGGCGT GGTCGATGCC GACCTGATGC TGCCCGAGCG CATCGCCCAG ACCCAGCCGG ACATGGTGAT CGTGGCCTCC GAATCGGCCG CGCGCGACAC CATCGAGCAC GTCTGCGTGG CCACCCAGCA CGCGCCGCGC CCCATCGTGC TGTTCACCGA CAACGACGAC GCGAGCCGCA TCAAGGCGGC GTTCGCGGCC GGCATCACCG CCTATATCGT CGACGGGCTC AAGCCGACCC GCGTGAAGGC GGTGCTGGAT GTCGCCTACG CGCGGTTCGA GCACGAGCGC GCGCTGCGCG CCGAGCTGGA CAACGCCAAG ACCCAGCTGG CCGAGCGCAA GGTGCTCGAG CGCGCCAAGG GCCTGCTGAT GCAGCAGATG CAGCTGTCGG AAGACGAAGC CTTCAAGCGC CTGCGCAAGA TGGCGATGGA CCGCAACATC AAGCTGGTGG AAGCGGCCCA GCGGGTCATC GACGTCATGG CCGGCTAG
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Protein sequence | MAPTRVLLVR DPLDAEQVNL ELIRAGLAEA GFVDVGVVDA DLMLPERIAQ TQPDMVIVAS ESAARDTIEH VCVATQHAPR PIVLFTDNDD ASRIKAAFAA GITAYIVDGL KPTRVKAVLD VAYARFEHER ALRAELDNAK TQLAERKVLE RAKGLLMQQM QLSEDEAFKR LRKMAMDRNI KLVEAAQRVI DVMAG
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